Gene Information

Name : Y11_p0851 (Y11_p0851)
Accession : YP_006007933.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : type III secretion low calcium response protein (LcrR)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58889 - 59329 bp
Length : 441 bp
Strand : +
Note : -

DNA sequence : 
ATGATGGAAGACCCTTTAATTCCGTGGCTTACCGAACATGGCTTGGTTTGCCACCCTCATACTTTGTCTGGCACCCCCAT
TTCTTTAGGTTCGGCCTTTCAATTAGCTGGCCTCAAGCTTGCCTGGCGCGTAGAAATTGAACAAAGGCGGGTTTGGATCG
TGCTTATCCAACGAGTGGAACAACGTCGAGGGCTGAAAAATCCCTTCGCGGCACTTTATATGTTAGCTAATGCAGCGCGG
GCCGTTCTTGGCCCTGACTATTATCTGTATGGCAATGTCGATGTACTGGCGGGGAGTTCTCTCAGTACGCAACGGCTCGC
TCATTTTTATCGGCGTTGGACCGGGGCCAAAGAATTAAGCACCGGGTGGTTCTCACTAAAAGTATCACAAGTCATCACCT
TATCTAATATGAAAAAGCGACAAAACAACGGCTTTGCCTGA

Protein sequence : 
MMEDPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVEQRRGLKNPFAALYMLANAAR
AVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELSTGWFSLKVSQVITLSNMKKRQNNGFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssR AAO18051.1 LssR Virulence TTSS locus Protein 3e-26 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0851 YP_006007933.1 type III secretion low calcium response protein (LcrR) VFG0383 Protein 6e-59 99
Y11_p0851 YP_006007933.1 type III secretion low calcium response protein (LcrR) VFG0199 Protein 2e-26 51