Gene Information

Name : Y11_p0821 (Y11_p0821)
Accession : YP_006007930.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : putative type III secretion protein YscX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 56082 - 56450 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTCGCATAATAACTGCCCCCCATATTGGCATCGAAAAACTGTCGGCGATTAGCCTGGAAGAGCTATCCTGTGGCTT
GCCTGATCGTTATGCCTTGCCGCCTGATGGGCATCCAGTCGAACCACATTTAGAGCGCCTTTACCCTACAGCACAAAGCA
AGCGTAGCCTATGGGACTTTGCTTCTCCCGGCTATACATTTCATGGATTACATCGAGCTCAAGATTATCGGCGCGAACTG
GATACCTTGCAGTCACTGCTAACCACCAGTCAGTCCTCAGAGCTACAAGCTGCCGCGGCGCTGCTGAAATGCCAACAAGA
TGATGATCGGTTACTGCAAATAATCCTTAACCTGTTGCACAAAGTATGA

Protein sequence : 
MSRIITAPHIGIEKLSAISLEELSCGLPDRYALPPDGHPVEPHLERLYPTAQSKRSLWDFASPGYTFHGLHRAQDYRREL
DTLQSLLTTSQSSELQAAAALLKCQQDDDRLLQIILNLLHKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssB AAO18048.1 LssB Virulence TTSS locus Protein 5e-18 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0821 YP_006007930.1 putative type III secretion protein YscX VFG0386 Protein 9e-39 99
Y11_p0821 YP_006007930.1 putative type III secretion protein YscX VFG0196 Protein 5e-14 50