Gene Information

Name : Y11_p0731 (Y11_p0731)
Accession : YP_006007921.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 49224 - 49490 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCAAGGTGACATAATTCACTTCACCAGTCAGGCATTATGGCTGGTGCTAGTCCTTTCAATGCCGCCGGTGTTAGT
GGCTGCGGTGGTAGGAACTTTGGTATCTTTAGTACAAGCTTTAACGCAAATCCAAGAGCAAACTCTGGGCTTCGTTATCA
AATTGATCGCTGTGGTGGTCACACTGTTTGCTACCGCCTCGTGGCTTGGTAATGAATTGCACAGTTTTGCAGAAATGACC
ATGATGAAGATACAAGGCATAAGATGA

Protein sequence :
MSQGDIIHFTSQALWLVLVLSMPPVLVAAVVGTLVSLVQALTQIQEQTLGFVIKLIAVVVTLFATASWLGNELHSFAEMT
MMKIQGIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 2e-19 79
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 4e-08 52
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 4e-08 52
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 4e-08 52
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-08 52
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 3e-08 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0731 YP_006007921.1 type III secretion inner membrane protein VFG0395 Protein 7e-25 100
Y11_p0731 YP_006007921.1 type III secretion inner membrane protein VFG0187 Protein 2e-11 75
Y11_p0731 YP_006007921.1 type III secretion inner membrane protein VFG0043 Protein 5e-08 56
Y11_p0731 YP_006007921.1 type III secretion inner membrane protein VFG0520 Protein 1e-08 52