Gene Information

Name : Y11_p0711 (Y11_p0711)
Accession : YP_006007919.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47378 - 48442 bp
Length : 1065 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA
GGAAGTGGTCTCTACTACGCTTATCGTCGCGCTGAGTGCGATGTTAATGGGGCTTTCTGACTACTATTTCGAGCATTTGA
GTAGGCTAATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG
CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTGGCGGCATTGATGGCGATCGCTTCTCATGTTGTGCAGTATGG
TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGTATCTTTTCCA
TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA
AATCTGGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT
GATGGTGATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCTGACTATGCCTTTGAATACTATCAATATATTAAGGAAC
TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGCCGTCAG
TTTCATCAAGAGATCCAATCGGGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT
TGCTATTGGTATTCTTTATAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA
CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG
CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA
GAAACAGCATTCCGAAATGTTATAA

Protein sequence : 
MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTTLIVALSAMLMGLSDYYFEHLSRLMLIPAEQSYLPFSQALSYVVDNVL
LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG
NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ
FHQEIQSGNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA
LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 9e-116 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0711 YP_006007919.1 type III secretion inner membrane protein VFG0397 Protein 6e-155 99
Y11_p0711 YP_006007919.1 type III secretion inner membrane protein VFG0185 Protein 2e-96 67