Gene Information

Name : Y11_p0561 (Y11_p0561)
Accession : YP_006007904.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : type III secretion cytoplasmic protein (YscL)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 37932 - 38570 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGCCATTTGTTCAAATAATACCAAGTAATCTCTCGCTCGCTTGCGGTCTGCGTATTTTGCGCGCCGAAGATTACCA
ATCCAGTTTAACTACCGAAGAGTTGATTAGTGCCGCAAAACAGGATGCTGAAAAGATTTTGGCTGACGCCCAAGAGGTTT
ATGAGCAACAAAAGCAGTTAGGATGGCAGGCGGGCATGGATGAGGCGCGTACCTTACAGGCGACTTTGATTCATGAAACA
CAGTTACAATGTCAGCAATTTTATCGCCACGTCGAACAACAGATGAGTGAAGTTGTACTTTTGGCGGTACGTAAAATCCT
CAATGACTATGATCAAGTGGATATGACACTGCAAGTTGTGCGGGAGGCTTTAGCCTTGGTGAGTAATCAGAAGCAAGTCG
TGGTCAGGGTCAACCCTGATCAGGCCGGAACTATTCGTGAACAAATAGCTAAAGTACATAAAGACTTCCCGGAAATAAGC
TATTTAGAGGTGACTGCCGATGCGCGTTTGGATCAAGGGGGCTGTATATTAGAGACTGAGGTAGGTATTATTGACGCGAG
TATTGATGGGCAAATTGAAGCACTTTCTCGGGCAATATCTACCACTTTAGGACAAATGAAAGTTACAGAAGAGGAATAA

Protein sequence : 
MQPFVQIIPSNLSLACGLRILRAEDYQSSLTTEELISAAKQDAEKILADAQEVYEQQKQLGWQAGMDEARTLQATLIHET
QLQCQQFYRHVEQQMSEVVLLAVRKILNDYDQVDMTLQVVREALALVSNQKQVVVRVNPDQAGTIREQIAKVHKDFPEIS
YLEVTADARLDQGGCILETEVGIIDASIDGQIEALSRAISTTLGQMKVTEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 4e-66 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0561 YP_006007904.1 type III secretion cytoplasmic protein (YscL) VFG0411 Protein 7e-94 99
Y11_p0561 YP_006007904.1 type III secretion cytoplasmic protein (YscL) VFG0220 Protein 8e-58 57