Gene Information

Name : Y11_p0521 (Y11_p0521)
Accession : YP_006007900.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Unknown
Product : integrase, catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33792 - 34295 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGCGCTCAATATTATCAGCTGTCAGCAACCTGGCCATCGTTATAAGAAGGCGTCTAAGGAACACATTGAGATCCC
TAATTATCTGGATCGCCAGTTTGCTGTTACCGAGCCTAATCAGGCCTGGTGCGGTGATGTGACTTATATCTGGACGGGAA
AACGCTGGGCTTATCTGGCTGTTGTACTCGATTTGTTTTCCCGTAAACCGGTTGGCTGGGCGATGTCATTTTTCCCTGAT
TCCGCACTGACAGGTAAAGCCCTGTCGATGGCCTGGGAAGCACGGGGAAAACCGGCTAATTTACTGTATCACTCGGATCA
AGGCAGTCACTATACCAGCAGGAATTTCAGACAGTTACTGTGGAGATATCAGATAAAGCAAAGCCTGAGTCGCCGGGGAA
ATTGCTGGGATAACAGCCCAATGGAACGGTTCTTCAGAAGCCTGAAAACAGAGTGGGTACCGGATAATGGCTACGCGAAT
TTTAGCGAAGCCAGCACGGCATAA

Protein sequence : 
MKALNIISCQQPGHRYKKASKEHIEIPNYLDRQFAVTEPNQAWCGDVTYIWTGKRWAYLAVVLDLFSRKPVGWAMSFFPD
SALTGKALSMAWEARGKPANLLYHSDQGSHYTSRNFRQLLWRYQIKQSLSRRGNCWDNSPMERFFRSLKTEWVPDNGYAN
FSEASTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 5e-65 80
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 5e-65 80
unnamed AAC31485.1 L0006 Not tested LEE Protein 5e-52 64
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 7e-52 64
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-52 64
Z5089 NP_290241.1 transposase Not tested LEE Protein 5e-52 64
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-51 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-51 63
l0006 CAD33765.1 L0006 protein Not tested PAI I 536 Protein 1e-38 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0521 YP_006007900.1 integrase, catalytic region VFG1484 Protein 2e-65 80
Y11_p0521 YP_006007900.1 integrase, catalytic region VFG0785 Protein 1e-52 64
Y11_p0521 YP_006007900.1 integrase, catalytic region VFG1506 Protein 5e-39 60