Gene Information

Name : Y11_07721 (Y11_07721)
Accession : YP_006004271.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 802584 - 803474 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGAACACTGCTGTTTTTGTCCGCCCGGAGTTGATAGTAGATAACGTCACTGTCACCTATAACAATGGGCATACTGCCAT
TTATGACGCCAGTTTCTCACTAATGGGTGGGACTATCTGCGCACTGGTCGGCGTCAACGGGAGCGGTAAATCCACCCTGT
TTAAAAGCATCATGGGGCAAGTCAAGCCCAGTGTGGGCAAAGTAGAGCTGAGCAATAAGCCAATTAGCCATGCATTAAAG
CAAAATACTATTGCCTACGTTCCACAGACGGAAGATGTAGACTGGAATTTTCCGGTATTAGTCGAAGACGTTGTCATGAT
GGGCCGCTACGGGAAAATGAATTTTTTACGCATTCCGAGTCGCGAAGATAAGGCCATTGTTGATAAGGCTATTGAGCGGG
TCGGATTAACCGTATTGCGTTCACGTCAGATAGGCGAACTGTCCGGCGGGCAGAAAAAACGCGTGTTTCTGGCGCGAGCA
CTGGCCCAGCAAGGTACTGTATTACTGCTAGATGAGCCATTCACCGGTGTTGATGTCAAAACGGAAAATGCCATCATAGA
TTTGTTGCGAGCGTTGCGTGATGAAGGTCACCTGATTTTGGTTTCGACCCACAACCTCGGCAGCGTGCCAGAGTTTTGTG
ATCATGTGATTCTGATTAATCAAACGGTACTGGCCGCAGGCCCTACAGAAACCACCTTTACTCAAAAGAACCTGGAAATG
ACCTTTGGTGGCGTATTGCGCCATATCAACTTGTCGGGGAACACGCTGCACGACGATAATGATCCACGCACCGTGACTGT
CATCACCGATGACGAGCGCCCAGCGGTATTTTATGGTCATACCAAAAATGATCCACCAGCACAAAGCCAGTCGAAGGAGA
GCAATCCCTGA

Protein sequence : 
MNTAVFVRPELIVDNVTVTYNNGHTAIYDASFSLMGGTICALVGVNGSGKSTLFKSIMGQVKPSVGKVELSNKPISHALK
QNTIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDKAIVDKAIERVGLTVLRSRQIGELSGGQKKRVFLARA
LAQQGTVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLILVSTHNLGSVPEFCDHVILINQTVLAAGPTETTFTQKNLEM
TFGGVLRHINLSGNTLHDDNDPRTVTVITDDERPAVFYGHTKNDPPAQSQSKESNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-79 66
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-79 66
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-80 66
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-80 66
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-79 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07721 YP_006004271.1 manganese ABC transporter ATP-binding protein SitB BAC0440 Protein 4e-134 94
Y11_07721 YP_006004271.1 manganese ABC transporter ATP-binding protein SitB BAC0350 Protein 9e-80 66
Y11_07721 YP_006004271.1 manganese ABC transporter ATP-binding protein SitB BAC0400 Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07721 YP_006004271.1 manganese ABC transporter ATP-binding protein SitB VFG0526 Protein 8e-80 66