Gene Information

Name : Y11_07711 (Y11_07711)
Accession : YP_006004270.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : manganese ABC transporter permease SitC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 801700 - 802584 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGGAAATCTTACTGCAACCCTTTAACTACAATTATATGGTCAAGGCCATTTGGGTCAGCGCGATTGTTGGTGCCGT
CTGCGCTTTCTTGTCCGCTTATTTAATGCTGAAAGGCTGGTCGCTGATGGGGGATGCGCTCTCTCACTCCGTGGTACCCG
GCGTCGCTGGCGCGTATGCCCTCGGCCTGCCCTATGCAGCAGGGGCATTCTTTACCGGTATGCTCGCCGCATTGGCAATG
ACTTTAGTGCGCCACATCACTCGCCTGCGTGAAGATGCCATTATCGGTTTTATCTTCTCCACCTTCTTTGCCGTCGGGCT
GCTCATTGTTTCGCTCAATCCCACCTCGGTCAATGTGCAGTCGATCATTTTCGGCAATATTTTGGGCATCGCCGATGAAG
ATGTGCTGCAAGTCGAAATCATTATTTTGATCTCTTTTGTGATTTTGTGTCTGATTTGGAAAGATTTACTGGCGGTGTTT
TTCGATGAAAGTCATGCCATGTCAATTGGCTTGTCACCACTGCGCTTAAAGATTTTATTCTTCACCTTATTAAGTGCTTG
TACGGTGGCGGCGTTGCAAACTGTCGGGGCGATTTTGGTGATTGCTATGGTCGTGACACCGGGTGCCACCGCCTACTTGC
TGACAGACCGATTCAGCCGTTTGCTGGTGATAGCGATTGCCATCGGCGCATTTACCAGCGCCTTTGGTGCCTATCTCAGT
TTCTATCTTGATGGCGCAACAGGTGGAGTTATCGTCACCTTACAAACCGTCGTGTTCCTACTGGCCTTTTTCTTCGCCCC
CAAACACGGTTTATTGGCGACGCGCTATCAATCGCGTCAGAAGCGCCGTCACCCTGCGGTCTCTCACCCGGAGGATAATG
CATGA

Protein sequence : 
MLEILLQPFNYNYMVKAIWVSAIVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAAGAFFTGMLAALAM
TLVRHITRLREDAIIGFIFSTFFAVGLLIVSLNPTSVNVQSIIFGNILGIADEDVLQVEIIILISFVILCLIWKDLLAVF
FDESHAMSIGLSPLRLKILFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDRFSRLLVIAIAIGAFTSAFGAYLS
FYLDGATGGVIVTLQTVVFLLAFFFAPKHGLLATRYQSRQKRRHPAVSHPEDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-75 65
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-75 65
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-75 65
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-75 65
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-75 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07711 YP_006004270.1 manganese ABC transporter permease SitC BAC0441 Protein 4e-113 96
Y11_07711 YP_006004270.1 manganese ABC transporter permease SitC BAC0351 Protein 4e-75 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07711 YP_006004270.1 manganese ABC transporter permease SitC VFG0527 Protein 4e-75 65