Gene Information

Name : Y11_07701 (Y11_07701)
Accession : YP_006004269.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : manganese ABC transporter permease SitD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 800828 - 801703 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
ATGAACACATTGTTCAGTCTGGTGAGCGAACCTTTCGCCTATCCTTTTATGCAACGGGCGATAGTCGCCGCGATTATCAC
CGGTGTGGTGTGCGCGGTGTTATCTTGCTACCTGGTATTAAAAGGTTGGTCATTAATGGGAGATGCCATCTCTCACGCCG
TGTTACCGGGCATAGTGTTGGCCTTTTGGCTCGGTATCCCATTGGTTATCGGTGCTTTTGTCTCGGGGATCTTTTGTGCG
GTCGCCACGGGCTACTTAAAAGAAAACAGTCGGGTTAAAGAAGATACCGTTATGGGGATTGTCTTCTCTGGCATGTTCGC
TTTCGGCCTGGTGCTATTTTCTCGCATGGATACCGATCAGCACCTGAGCCATATTTTGTTCGGTAATATGCTGGGTATTT
CGCTAGCGGAACTGAAGCAAACGCTGTGGATCGCCGGCTTCACATTGTTAGTTGTGCTATTAAAACGTAAAGACTTCATG
CTGTACTGTTTTGACCCAAACCATGCCCGTGTCATTGGGTTACAGGTTAAGTTATTGCACTATGGTTTACTCTGTTTGCT
GGCATTAACTATCGTAGCTTCATTACAGGCGGTGGGGGTTATTTTAGTTATCGCTATGTTGATAGCACCCGGCATTATCG
CCTTTATGGTTTGTCGCAGTTTTGATCAAATGTTAGTTGTAGCTACTGTCGTTTCGGTGGTCGCATGCGTATTAGGCACC
TTAATAAGCTTCCATATTGATGGCGCTACAGGGCCTTGCATTGTCATTATTCAGGCACTGTTCTTTGTTATTGCGCTTAT
TTATAACCGTATATCCCCCAAAATAATTCGAGTTGCAGGAAGGCGGCCAGGGGATAATCCCGATGAGCTTACATGA

Protein sequence : 
MNTLFSLVSEPFAYPFMQRAIVAAIITGVVCAVLSCYLVLKGWSLMGDAISHAVLPGIVLAFWLGIPLVIGAFVSGIFCA
VATGYLKENSRVKEDTVMGIVFSGMFAFGLVLFSRMDTDQHLSHILFGNMLGISLAELKQTLWIAGFTLLVVLLKRKDFM
LYCFDPNHARVIGLQVKLLHYGLLCLLALTIVASLQAVGVILVIAMLIAPGIIAFMVCRSFDQMLVVATVVSVVACVLGT
LISFHIDGATGPCIVIIQALFFVIALIYNRISPKIIRVAGRRPGDNPDELT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-56 55
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-56 55
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-56 55
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-56 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 9e-57 55
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-40 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-40 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-40 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD BAC0442 Protein 3e-109 92
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD BAC0352 Protein 5e-57 55
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD BAC0351 Protein 8e-41 41
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD BAC0441 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD VFG0528 Protein 5e-57 55
Y11_07701 YP_006004269.1 manganese ABC transporter permease SitD VFG0527 Protein 7e-41 41