Gene Information

Name : Y11_42091 (Y11_42091)
Accession : YP_006007708.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4395053 - 4396336 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence : 
ATGGCACCCTCTTTGGGACCCAAAACAAAGGGTCCAAAACTTGAGGGTCCCAAAATGGCAAAACTCGCAAAAAAACTCAC
GGATACTGAAATCAAAAGCGCTAAACCTGCAGACAAAGAAATCAACTTGTTTGACGGTGATGGCCTAATACTAAGAATCG
CGCCCCTCTCAAGGGGGGGTAAGAAAAATTGGTATTTCAGGTATGCAGTGCCAGTAACTAAAAAGCGAACAAAGGTAAGC
CTCGGAACCTACCCCCACCTCACGTTAGCAAGAGCAAGAGTTTTGCGGGATGAATACCTATCCTTACTTGCCAATGGCAT
CGATCCACAAGTCCATAACAACGATAAGGCTAATGCATTAAAGGATGCTACTGAGCACACACTCCAAGCCGTTGCAAGAA
AGTGGTTAGATGAGAAGGTAAAAACCTCGGGTATCTCACAGGACCACGCTAATGACATTTGGCGTAGCCTTGAGCGAAAC
ATATTTCCCGGTTTGGGTAATGTCCCTATCAAAGAGATCCGGCCTAAGTTATTGAAGCAGCATCTTGACCCAATTGAACA
ACGTGGTGTATTGGAAACCCTGCGCCGAATTATTTCCCGCCTAAATGAAATCTTCCGCTGGGCAGCGACAGAAGAACTTA
TTGAGTTTAATCCTGCTGATAACCTTGGTCAGCGTTTTAGTAAACCTAAAAAGCAAAATATGCCCGCCCTTCCCCCAAGT
GAACTACCAAGATTTATGGTTGCTCTGGCGAATGCTTCCATACGGCTGGAAACACGTATGCTGATTGAATGGCAATTGCT
TACTTGGGTTCGCCCCGGAGAGGCTGTTCGTTCGCGTTGGGTTGACATCGATACAGAGAACAAAATCTGGAACATACCCC
CTGAATTTATGAAGATGAAACGGCCTCATAAAGTGCCACTCAGCAAAGAAGCTCTTCGTATACTAGAAAATATGCAGCCT
ATCAGCAGCCATCGTGAATGGGTATTTCCCAGCATAAAAACTCCACTGACCCATATGCATGAGCAAACAGCCAATGCAGC
GTTAATCCGTATGGGTTTAGGTGGTGAATTGGTTGCTCATGGGATGCGGTCTATAGCAAGGACTGCTGCAGAAGAAAGCG
GTAAATTTAGGACTGAAGTGCTTGAATCAGCTTTAGCTCATACCAAAAGCACTGAGATTATAGCCGCTTACAATCGTGCA
GAATATCTCGTCGAAAGGGCAGGTCTTATGCAATGGTGGGGGGATTATATTCAAGCTCAGAAACATAAGGCTATTGCAGC
GTGA

Protein sequence : 
MAPSLGPKTKGPKLEGPKMAKLAKKLTDTEIKSAKPADKEINLFDGDGLILRIAPLSRGGKKNWYFRYAVPVTKKRTKVS
LGTYPHLTLARARVLRDEYLSLLANGIDPQVHNNDKANALKDATEHTLQAVARKWLDEKVKTSGISQDHANDIWRSLERN
IFPGLGNVPIKEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPS
ELPRFMVALANASIRLETRMLIEWQLLTWVRPGEAVRSRWVDIDTENKIWNIPPEFMKMKRPHKVPLSKEALRILENMQP
ISSHREWVFPSIKTPLTHMHEQTANAALIRMGLGGELVAHGMRSIARTAAEESGKFRTEVLESALAHTKSTEIIAAYNRA
EYLVERAGLMQWWGDYIQAQKHKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-84 46
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-84 46
int AAK20773.1 integrase Not tested VPI Protein 1e-84 46
int AAK20803.1 integrase Not tested VPI Protein 1e-84 46
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-84 46
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-81 45
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-65 42
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-65 42
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-65 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_42091 YP_006007708.1 phage integrase VFG1092 Protein 1e-65 42