Gene Information

Name : Y11_41191 (Y11_41191)
Accession : YP_006007618.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : lysine decarboxylase, inducible
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.1.18
Position : 4312250 - 4314391 bp
Length : 2142 bp
Strand : +
Note : -

DNA sequence :
ATGAATATCATCGCAATCATGGGGCCGATGGGGGTTTATTATAAAGATGAACCTATTCGAGAGTTGAACGACGCCCTGCT
CGCCAGAGGTTTTCAGCTCATCTATCCTAAGAGTCGTGGTGATCTGCTCAAGCTTATTGAGCACAATGCGTGTATTATTG
GTGTGATTTTTGATTGGGACCAACACAGTAATGAACTTTGCGCTGAGATTAATGATCTAAACGAATATCTGCCACTTTAT
GCATTTATCAATACCACATCGTCACTGGATGTCAGTTTGAATGAAATGCGCATGGCACTTTATTTCTTTGAATATACTCT
GAATGCCGCAGAAGATATTGCTCAACATATTGAACAATACACGACAGAGTATATGGATAGTATTACCCCGCCTTTAACTA
AAGCACTGTTTAATTATGTTAAAGAAGGAAAGTATACATTTTGTACTCCTGGACACATGGCGGGAACGGCTTTTCAAAAA
AGTCCGGTGGGGAGTTTGTTCTATGATTTCTTTGGCGCTAATACCCTTAAAGCGGATATTTCAATCTCCGTTACTGAACT
GGGATCATTATTAGATCATACCGGGCCACATTTGGAGGCCGAGGAATATATTGCCCGCACATTTAATGCCGAACAGAGCT
ATATGGTAACGAATGGCACATCGACGGCGAATAAAATCATTGGTATGTACGCATCACCTGCAGGCAGTACGGTACTGATT
GACCGAAATTGCCATAAGTCTCTGACGCATCTATTAATGATGAGCGATATTATTCCTCTTTATTTATGTCCTGCGCGAAA
TGCTTATGGCATTTTAGGGGGGATCCCGCAGCGCGAATTTACTAAAACCTCCATCGAGGCAAAAGTTGCGCAGACTAACA
ATGCCAGTTGGCCGGTACATGCAGTAATAACCAACTCGACCTACGATGGCTTGCTCTATAATACGGATTATATTAAGCAG
ACATTGGATGTTTCTTCCATTCACTTTGATTCCGCCTGGGTTCCTTATACTAATTTTCATGAAATTTATGAGGGTAAAAG
TGGCATGAGTGGCGAGCGAATGGTGGGAAAAGTATTTTATGAAACGCAATCAACCCATAAATTACTGGCCGCATTCTCTC
AGGCGTCAATGATTCATATTAAAGGTGATTACAGTGAAAGTACCTTTAATGAAGCTTACATGATGCACACCACTACCTCG
CCCAATTATGGCATTGTTGCTTCGATGGAAACGGCGGCAGCCATGATGCGCGGTAATCCGGGACGGCGCATGATTTTACG
TTCTATTGAGCGGGCGATGCATTTTCGCAAAGAAGTGCGCAGATTGCGTTCAGAAAGTGATAATTGGTTTTTCGATGTTT
GGCAGCCGGAAGATATTGACGAAATAGCCTGCTGGCCACTCCAACCGGGGCAAGCGTGGCATGGTTTTAGTCATGCGGAT
GCTGATCATATGTATCTTGATCCGATCAAAGTGACAATTCTAACTCCGGGAATGAGCCACGAAGGAGCACTTGAAGAGAA
AGGGATCCCCGCCGCATTGGTAGCAAAGTTTCTGGATGAACGTGGGATCGTGGTAGAAAAAACCGGCCCCTATAATTTGT
TATTCTTATTTAGTATCGGTATTGATAAAACTAAGGCAATGAGTTTATTGCGCGGCCTGACCGATTTTAAGCGCGCTTTT
GATCTTAATTTGCGGATTAAAAATATGTTGCCAGATCTGTTTGCTGAAGATCCTGATTTTTATCGCCATATGCGCATTCA
GGATCTGGCTGCAGGTATTCATAACATGATCCGCCAACATGATTTACCTCGCCTGATGCGCAAGTCATTTGATGTATTGC
CAGAGATGAAACTCACGCCTTATAACATGTTCCAACAGCAGGTCCGCGGTAATATAGTCGCTTGTGATATGGCTGATTTG
GTTGGCAAGGTGGTCGCCAACATGATCTTACCTTATCCACCGGGAGTTCCATTAGTCATGCCGGGTGAAATGATTACCGC
AGAGAGCCGTGCAGTATTGGATTTCCTCCTGATGCTTTGTGCTATTGGTGCTCGTTATCCTGGGTTTGAAACGGATATAC
ATGGTGCTAAGCGTGATGAGCATGGGCGTTACTGGGTCAATATACTAGATACAAAACAATAA

Protein sequence :
MNIIAIMGPMGVYYKDEPIRELNDALLARGFQLIYPKSRGDLLKLIEHNACIIGVIFDWDQHSNELCAEINDLNEYLPLY
AFINTTSSLDVSLNEMRMALYFFEYTLNAAEDIAQHIEQYTTEYMDSITPPLTKALFNYVKEGKYTFCTPGHMAGTAFQK
SPVGSLFYDFFGANTLKADISISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYMVTNGTSTANKIIGMYASPAGSTVLI
DRNCHKSLTHLLMMSDIIPLYLCPARNAYGILGGIPQREFTKTSIEAKVAQTNNASWPVHAVITNSTYDGLLYNTDYIKQ
TLDVSSIHFDSAWVPYTNFHEIYEGKSGMSGERMVGKVFYETQSTHKLLAAFSQASMIHIKGDYSESTFNEAYMMHTTTS
PNYGIVASMETAAAMMRGNPGRRMILRSIERAMHFRKEVRRLRSESDNWFFDVWQPEDIDEIACWPLQPGQAWHGFSHAD
ADHMYLDPIKVTILTPGMSHEGALEEKGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAF
DLNLRIKNMLPDLFAEDPDFYRHMRIQDLAAGIHNMIRQHDLPRLMRKSFDVLPEMKLTPYNMFQQQVRGNIVACDMADL
VGKVVANMILPYPPGVPLVMPGEMITAESRAVLDFLLMLCAIGARYPGFETDIHGAKRDEHGRYWVNILDTKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 72
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_41191 YP_006007618.1 lysine decarboxylase, inducible VFG1670 Protein 0.0 63