|
Name : Y11_40341 (Y11_40341) Accession : YP_006007533.1 Strain : Yersinia enterocolitica Y11 Genome accession: NC_017564 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4215959 - 4217464 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGAACCAAGATAAAACAGAATCATTACCACTCACTTTTAGCTGGGCAAAGGATAATGGCGTGATCTTATCTCCTGCCGA TAAAGGATATCAACTAATCTGTCGTAATTCTGCTTCTCTCGACGCAATACTGGAAGGTAACAGGGTTGGGAATAAACCTA TTTCACTTGATTTCGTTACTGACGATGAATTTGATAATAGCCTTGCGGCAGTATATCAGAATAGCTCAATGGAATCGCAT AAAATAATGAATTCTATCAGTGATGAAATAGCTATTTACTCATTTAATGGTGAGCTACCTGTGAGTGAAGATTTACTCGA TAGCAATAATGAAGCACCAGTAATAAAGTTAATAAATACAATTTTTGTAGAGGCAATTAAAGAGTTAGCATCAGATATCC ATATAGAGTCTTTTGATGAAAAAATCACGATAAGGTTTCGTATTGATGGCGTATTAAAAAATATATTAGAACTACCGCGA CGAGTTGCGTTATTATTAGTGTCACGGGTTAAAATCATGGCAAAGTTAGATATCGCTGAAAAACGGATCCCACAGGACGG GCGTATCGCACTGAGTTTAGCTGGTAAAGCTTTAGATGTTCGAGTCTCGATATTACCAGTAAATCATGGTGAACGTGTTG TCATGCGGTTGCTAGACAAACATAGCCTCAAATTAGATTTAGAGTCTTTGGGGATGTCGCAAAAAAACTGTCAACTTATG AAGACATTGGTTCTCAAACCTCATGGCATAATATTGATTGTTGGCCCAACAGGTGTGGGGAAAAGCACCACACTTTACGC TGCTTTAATGGGAATAAATGCCAGTGAACGGAATATCATGACAGTAGAGGATCCTATTGAATTTGACATTGATGGTATTT CTCAGACGCAGGTTAACGCGAAAATAGATATGACTTTTTCACGCAGTCTAAGAGCAATCTTGCGTCAAGATCCTGATGTT ATTCTAATTGGTGAAATACGAGATGTCGAAACGGCACAAATAGCAGTGCAAGCTTCATTAACTGGGCATTTAGTATTATC AACATTACACGCCAACAGTGCTATCGGTGCCGTCACCAGACTCAAAGATATGGGGATTGAACCATTTATGTTATCAAGTT CATTATTGGCTGTATTATCTCAACGCCTGGTTCGCAAGTTATGCACTGAATGCCGAAAACAATATGATTCCCCACATGAA ATATTGCAAGAGTTAATTGGCCCTGAGAAAATACCTGCAGATAGATATGGATTTAGTGCAATAGGTTGTGATAAGTGCAA TACAGTAGGCTATAGAGGAAGAATAGCCTTGCATGAACTGCTAATTATTGATAACAATTTGCGTAAAGCTATTTATAAGG GAAAGAGCGAGCTTGATTTAAGTCAGTTAGCTAAACAATATACTCGTAGCATAGAACAAGATGGAATTGATAAAGTTATC GCAGGTTTTACAACAATAGAAGAAGTGATGAGGATAAATTTAGAGGAAAAATATGCCTGTATATGA Protein sequence : MNQDKTESLPLTFSWAKDNGVILSPADKGYQLICRNSASLDAILEGNRVGNKPISLDFVTDDEFDNSLAAVYQNSSMESH KIMNSISDEIAIYSFNGELPVSEDLLDSNNEAPVIKLINTIFVEAIKELASDIHIESFDEKITIRFRIDGVLKNILELPR RVALLLVSRVKIMAKLDIAEKRIPQDGRIALSLAGKALDVRVSILPVNHGERVVMRLLDKHSLKLDLESLGMSQKNCQLM KTLVLKPHGIILIVGPTGVGKSTTLYAALMGINASERNIMTVEDPIEFDIDGISQTQVNAKIDMTFSRSLRAILRQDPDV ILIGEIRDVETAQIAVQASLTGHLVLSTLHANSAIGAVTRLKDMGIEPFMLSSSLLAVLSQRLVRKLCTECRKQYDSPHE ILQELIGPEKIPADRYGFSAIGCDKCNTVGYRGRIALHELLIIDNNLRKAIYKGKSELDLSQLAKQYTRSIEQDGIDKVI AGFTTIEEVMRINLEEKYACI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-123 | 54 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-123 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Y11_40341 | YP_006007533.1 | general secretion pathway protein E | VFG2048 | Protein | 9e-123 | 53 |
| Y11_40341 | YP_006007533.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-127 | 52 |
| Y11_40341 | YP_006007533.1 | general secretion pathway protein E | VFG1876 | Protein | 8e-119 | 48 |
| Y11_40341 | YP_006007533.1 | general secretion pathway protein E | VFG2426 | Protein | 3e-71 | 42 |
