Gene Information

Name : Y11_39621 (Y11_39621)
Accession : YP_006007461.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : ferric hydroxamate ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4144354 - 4145148 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
TTGGACCAACAGGCAAGCCAATCCAGCGTATTCTCACTTCACGAGCTGAGCTTTTCGGTTCCTGGCCGAACCTTATTGCA
ACCTTTGTCACTGACATTTCCACAAGGGAAAGTTTGCGGGCTGATTGGTCATAATGGTTCCGGTAAATCGACGCTTTTAA
AAATGCTGGGTCGCCATCAACTGCCTTCCAGTGGCAAGGTGTTGCTCAATGATGTGCCATTACCGCTGTGGGACAACAAG
GCTTTTGCCCGCGAAGTCGCTTACTTGCCGCAGCAATTACCGGCAGCTGAAGGGATGACCGTGCGCGAACTGGTCGCGAT
TGGTCGTTATCCGTGGCATGGTGCGCTGGGGCGTTTTCGTCAGGAAGACCGCGAACAGGTGGAAGAAGCGATTGCGCTAG
TGGATTTAAAACCTCTGGCGAATCGGTTGGTCGACAGCTTATCCGGTGGTGAACGCCAACGCGCCTGGCTGGCGATGTTG
GTGGCGCAAAATAGCCGATGCCTGCTGCTTGATGAGCCGACCTCGGCACTCGATATCGCACATCAGATTGAGGTGCTGGG
GCTGATTCAGCGCCTTAGTCGCGAGCGTGGCCTGACAGTTATTGCGGTATTACACGATATCAATATGGCGGCCCGTTATT
GCGACCATTTGGTAGCGCTACGTGGTGGTGAGATGATAGCGCAAGGCCCTGCTGACAGCCTGATGCAAGGTGCTGTTCTG
GAACAGATTTACGGTATTCCTATGGGAATATTACCCCATCCGGCCGGTGGTGCGCCGGTAAGTTTCGTGTATTAA

Protein sequence : 
MDQQASQSSVFSLHELSFSVPGRTLLQPLSLTFPQGKVCGLIGHNGSGKSTLLKMLGRHQLPSSGKVLLNDVPLPLWDNK
AFAREVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFRQEDREQVEEAIALVDLKPLANRLVDSLSGGERQRAWLAML
VAQNSRCLLLDEPTSALDIAHQIEVLGLIQRLSRERGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGPADSLMQGAVL
EQIYGIPMGILPHPAGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-45 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-44 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-37 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-37 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-37 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_39621 YP_006007461.1 ferric hydroxamate ABC transporter BAC0164 Protein 6e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_39621 YP_006007461.1 ferric hydroxamate ABC transporter VFG0925 Protein 1e-44 44
Y11_39621 YP_006007461.1 ferric hydroxamate ABC transporter VFG1042 Protein 5e-45 43