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Name : Y11_39211 (Y11_39211) Accession : YP_006007420.1 Strain : Yersinia enterocolitica Y11 Genome accession: NC_017564 Putative virulence/resistance : Virulence Product : type IV fimbrial assembly, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 4097004 - 4098470 bp Length : 1467 bp Strand : - Note : - DNA sequence : ATGACCGAACTCATGGAATGTCCACACGAGACAATAAATGATGAATTACACACCATTTGCCGCCGTTATAGATCAATAGC CTTAAAACTTGATGGCAAGAACCTAACCATAGCGTCACCTCACCCAGTCAATGAGGCGTTGCTAACTGCGCTGCGTTTTG CGTGTGGCCGTAAAATCAAGGTGGAATACTGGCCGGAGGCCAGAATTGAGCAATCACTCAATTTGAGCCCATCAACGCAA GAGCACTTAGAAACTAACGTACCTATAAAGGGAGCTGATGACACATTACTTGATAATGAAAACGATACACCTGTTATTCA ATTTATAACGCAGACACTCAGGTTGGCGATTCAGAAACGTGCATCAGATATCCATTTTGAACCTTATCAATATCACTACC GCATTCGTCTAAGAATTGATGGCGTATTACATGAATCCCCATCGCCTACAGTTGAGTTATCTCGTCGCATTAGCAGTTGC CTGAAGGTTATGTCTAAACTGAATATTGCGGAAAAACGGTTAGCGCAAGATGGTCAGTTAGCTCTGATATTAGACGGTAT CCGCTACTCAATGAGAATAGCGACCCTCCCCGTGCAATATGGTGAAAAAGTCGTGCTGCGAATTCTCAATATGAAGCAGC AGCCTACTCTGGAAAAACTGGGACTTACAACAGTGGCCCACCAGCAATTAACTCAAGCGCTATCAGCGCCTCAGGGGTTG GTTCTGGTTACTGGGCCAACAGGAAGTGGTAAGACAGTCACTCTCTATTGCAGCCTGGAGCAGCTCAATCAGGAACAAAT AAACATCTGTAGCGTTGAAGATCCTATCGAGATCCAGGTTGACGGTATAAATCAAACACAGACCAACAGTAAAATTGGGC TGGATTTTTCTAATGTATTGCGTGCCATGCTTCGTCAGGATCCTGATGTCATTATGCTCGGTGAGATTCGTGATAATGAA ACCGCAGAAATAGCAGTTAAAGCAGCACTAACGGGGCATCTGGTTCTCTCAACCTTGCATACCAACTCCACAGCTGAAAC ACTGATACGCCTGACACACATGGGCGTAGAGCGTCACTTAATTGCTTCCAGCCTAATATTAGTTATCGCCCAACGATTAG TCCGAAAATTGTGCCTGCATTGTCGTCAGGCGTCATCAGTCCCTTTCCTGACACCACCAGATATATGGGCAAGTCCACTG CAACATTATCTTGCCGTTGGTTGTGAACATTGCTGTGCCGGATATTATGGTCGAACGGGAATTTACGAAATGTTAAATGT CACCCCGCCAATCCAACAAGCTTTACTTAATAATGTCAGCCCAGCAGAACTCACCAGGATTGCGCAAGAACAAAAACAAG TCACATTACTTTCGGCGGGTCTGGCATTGGTCGAAAACGGTATGACCACTCTCAGAGAAATTAATCGTGTTGTGGGGCTG CAAATACAAGTTGAGGCAATACCGTGA Protein sequence : MTELMECPHETINDELHTICRRYRSIALKLDGKNLTIASPHPVNEALLTALRFACGRKIKVEYWPEARIEQSLNLSPSTQ EHLETNVPIKGADDTLLDNENDTPVIQFITQTLRLAIQKRASDIHFEPYQYHYRIRLRIDGVLHESPSPTVELSRRISSC LKVMSKLNIAEKRLAQDGQLALILDGIRYSMRIATLPVQYGEKVVLRILNMKQQPTLEKLGLTTVAHQQLTQALSAPQGL VLVTGPTGSGKTVTLYCSLEQLNQEQINICSVEDPIEIQVDGINQTQTNSKIGLDFSNVLRAMLRQDPDVIMLGEIRDNE TAEIAVKAALTGHLVLSTLHTNSTAETLIRLTHMGVERHLIASSLILVIAQRLVRKLCLHCRQASSVPFLTPPDIWASPL QHYLAVGCEHCCAGYYGRTGIYEMLNVTPPIQQALLNNVSPAELTRIAQEQKQVTLLSAGLALVENGMTTLREINRVVGL QIQVEAIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-76 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-76 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG2048 | Protein | 3e-77 | 47 |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG1876 | Protein | 4e-70 | 47 |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG1880 | Protein | 5e-85 | 46 |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG2426 | Protein | 2e-74 | 45 |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG0182 | Protein | 2e-71 | 45 |
| Y11_39211 | YP_006007420.1 | type IV fimbrial assembly, ATPase PilB | VFG0112 | Protein | 2e-87 | 42 |
