Gene Information

Name : Y11_36601 (Y11_36601)
Accession : YP_006007159.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein basR/pmrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3796123 - 3796782 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACTACTGATTGTCGAAGATGATGAACTACTGCAACGAGGGATAGCTATGGCGCTGACCAGCGGGGGCTATGCCTG
CGACTGTGCTGGCACCGCGGCACAAGCGCATAGTTTGTTACTCTCCAGTCAGTACAGCATGGTTATTCTCGATCTCGGTT
TACCAGATCAGGATGGCGCAGTATTGCTGCGTCAATGGCGACGCCAGCACATCACGCTACCAGTGCTGATCCTTACTGCT
CGTGATGCCCTTGAGGATAGAGTTGATGGGCTGGATGCCGGTGCTGACGATTATCTGATAAAACCTTTCGCTCTGGCAGA
ATTATTGGCCCGTGTACGAGCACTTATCCGCCGCTATCAAGGGCAAAGTGACAATCTGATACAGCAAGATGACCTGAGCC
TCAACCTATCAACACAGCAAGTGTGTTTGCAGGGTCAGGCGCTGGAAGTCACACCGAAAGAATTTGCGATTTTGTCGCGT
TTAATCATGCGAGCGGGTCAAACCGTCAATCGTGAGCTGTTGCAACAAGATCTGTATACCTGGAATGACGATCTTGGCTC
CAATACACTGGAAGTACATATCCACAATCTGCGACGTAAATTGGGCAAAGATCGGATCCGAACAATTCGGGGTATTGGCT
ATCGGCTGGAAGCACCATGA

Protein sequence : 
MKLLIVEDDELLQRGIAMALTSGGYACDCAGTAAQAHSLLLSSQYSMVILDLGLPDQDGAVLLRQWRRQHITLPVLILTA
RDALEDRVDGLDAGADDYLIKPFALAELLARVRALIRRYQGQSDNLIQQDDLSLNLSTQQVCLQGQALEVTPKEFAILSR
LIMRAGQTVNRELLQQDLYTWNDDLGSNTLEVHIHNLRRKLGKDRIRTIRGIGYRLEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-34 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA BAC0487 Protein 6e-56 67
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA CP001918.1.gene5135. Protein 2e-14 41
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA CP001138.1.gene4273. Protein 3e-14 41
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA BAC0533 Protein 6e-14 41
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA CP000647.1.gene4257. Protein 6e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA VFG0473 Protein 3e-49 56
Y11_36601 YP_006007159.1 transcriptional regulatory protein basR/pmrA VFG0596 Protein 8e-25 42