Gene Information

Name : Y11_35491 (Y11_35491)
Accession : YP_006007048.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3679622 - 3680698 bp
Length : 1077 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGGTGAAAGCAGTGAAAAGAATGAAAAGCCCACTGCTAAACGGCTGAGAGAAGCGCGGGAGAAAGGGCAGGTCAT
CAAGAGTGTCGAGATAACCTCTGGGATGCAATTAGTGGTGCTGGTGGCTTATTTTTTTCTGGTGGGTAACACCATCATTG
ATCAGATTGGTGCTTTGATCCGCAGTACAATCAACCAATTACAGCAACCCTTCACCTTCGCGCTGGCGCGTATTGGGTCA
GAATGCACGGCGGTGCTCATCCATATTGTGGGAATCCTGGGCGGAGCGCTGATTTTGATGACAATTATTGCCGGAATTGC
ACAGGTCGGGCCGCTATTTGCAACTAAAGCTGTAGCGTTTAAAAGCGAGCATATCAATCCAATCGATAATGCCAAACAGC
TCTTTTCATTGCGTAGCCTGTTTGAGTTAATTAAATCTTTACTAAAGGTAGGGGTGTTAACCCTGATTTTCGGCTATCTA
TTGGCGCAATATGCCACTTCTTTTGGTTATCTGGCGTATTGCGGCAGTAGTTGCGCGATCCCGGTATTTGGCACATTAAT
GAGCTGGCTTTTGGGTGCATTAATTGCCTGTTATGTGGTTTTTTCTCTACTGGATTATACTTTTCAGCACTATAACACCA
TGAAACAACTGAAAATGTCTCACGAAGAGGTTAAGCGGGAATACAAAGATAGCGATGGTGACCCACATATTAAGCAGAAG
CGGCGGCAATTACAGCAGGAGGTACAAAGCGGCAGTTTCGCTAAAAATGTCCAGCGTTCCACGGCGATAGTGCGTAATCC
CACCCATTTTGCTGTTTGTCTGTTTTATCACCCAGATGATGCTCCACTTCCAATGGTGATTGAAAAAGGCAAAGGTGAAC
GGGCTGCATTGATTATCAAATTGGCGGAACAGCAAGGCATTCCGATTGTAGAAAATATTGCACTGGCTCGCGCATTACAT
CGCGATGTGGTTTGTGGCGATACCATACCTGAAACCTTATTTGAACCGGTTGCCGCTATCTTGCGCCTGGCTTTAGCGCT
GGATTATCAATCCCCGGAGGAGGATGAACAACATTGA

Protein sequence :
MSGESSEKNEKPTAKRLREAREKGQVIKSVEITSGMQLVVLVAYFFLVGNTIIDQIGALIRSTINQLQQPFTFALARIGS
ECTAVLIHIVGILGGALILMTIIAGIAQVGPLFATKAVAFKSEHINPIDNAKQLFSLRSLFELIKSLLKVGVLTLIFGYL
LAQYATSFGYLAYCGSSCAIPVFGTLMSWLLGALIACYVVFSLLDYTFQHYNTMKQLKMSHEEVKREYKDSDGDPHIKQK
RRQLQQEVQSGSFAKNVQRSTAIVRNPTHFAVCLFYHPDDAPLPMVIEKGKGERAALIIKLAEQQGIPIVENIALARALH
RDVVCGDTIPETLFEPVAAILRLALALDYQSPEEDEQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0273 YP_002345355.1 secretion system apparatus protein SsaU Virulence Not named Protein 3e-140 77
ssaU NP_456106.1 putative type III secretion protein Virulence SPI-2 Protein 2e-79 49
ssaU NP_805093.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 2e-79 49
ssaU YP_216430.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 1e-77 48
ssaU NP_460387.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 3e-79 48
ssaU CAA68202.1 secretion system apparatus, SsaU Virulence SPI-2 Protein 2e-79 48
escU AFO66307.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-60 42
escU AFO66403.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-60 42
escU AAL57530.1 EscU Virulence LEE Protein 7e-65 41
escU CAI43886.1 EscU protein Virulence LEE Protein 7e-65 41
escU CAC81850.1 EscU protein Virulence LEE II Protein 6e-65 41
escU YP_003223487.1 T3SS structure protein EscU Virulence LEE Protein 1e-64 41
escU AAK26703.1 EscU Virulence LEE Protein 7e-65 41
escU YP_003232141.1 secretion system apparatus protein SsaU Virulence LEE Protein 8e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_35491 YP_006007048.1 type III secretion inner membrane protein VFG0522 Protein 1e-79 48