Gene Information

Name : Y11_35241 (Y11_35241)
Accession : YP_006007023.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : secretion system effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3664102 - 3664683 bp
Length : 582 bp
Strand : +
Note : -

DNA sequence : 
ATGACATTGAATACTAATGTGTTAAGTAGCAATTCTCCGGATGCAGTTAATACATCATTCGACAATACAACAAATGGTAA
CGGTTCTAAAAATTGTTGTGAAGATTATGATGTTTTTGGCTATGGATTATTAGTTTTATATGAATTTCTTAATACTCTTT
CCTCTCTTGCCAGAGAGAGTTTTAAACATATGAGAGAGCGTGCGAATTATGCCAATGACGTACAAGACATGTCGAATCGG
GTTGATGAGGTTATTGCTGACGCTGCAAAAGGGGATGACAAGACTAAAAAACCATTACCTGATGATGTAATAGATTTTAT
GCGTAAAAATAATATTAATGTCGATGGTATGAATATCGACGATTATTTAAAAAAGAACGGGCCAGAATTAGATAAAGGGC
AACTACAGGCAGTAAAAGCGTCATTGGATAATGAGAAGAATCGTGCTACCGATACTAACACTCAAGAGCAATTACAGATA
CAGAAAGCCACACAGAGCTGTAATGTTTGCTCCACTAACATCAGCACATTGCAGACAGGCTTAAAAGATTTGCTGATGAC
TATTGCCCGCAATCTTTGCTAA

Protein sequence : 
MTLNTNVLSSNSPDAVNTSFDNTTNGNGSKNCCEDYDVFGYGLLVLYEFLNTLSSLARESFKHMRERANYANDVQDMSNR
VDEVIADAAKGDDKTKKPLPDDVIDFMRKNNINVDGMNIDDYLKKNGPELDKGQLQAVKASLDNEKNRATDTNTQEQLQI
QKATQSCNVCSTNISTLQTGLKDLLMTIARNLC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 8e-20 42
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 8e-20 42
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 5e-20 42
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 6e-20 42
sseB CAA12185.1 SseB Virulence SPI-2 Protein 6e-20 42
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 8e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_35241 YP_006007023.1 secretion system effector protein SseB VFG0499 Protein 2e-20 42