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Name : Y11_30771 (Y11_30771) Accession : YP_006006576.1 Strain : Yersinia enterocolitica Y11 Genome accession: NC_017564 Putative virulence/resistance : Virulence Product : type 1 fimbriae anchoring protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 3171308 - 3173761 bp Length : 2454 bp Strand : - Note : - DNA sequence : GTGCGGGCCGAAGAGCACTTTAACTCGGCATTGCTGGAAATTGATAACCAGCAACAAAGCCATACTGATCTATCGGTGTT TGAGCAGGAGCCGAATCAAGCATCCGGCACCTATCGTGTCGACATTTATATCAATAATGAGCTGTTGGATACTCGTGATG TGGTGTTTAGCATGCAAAAAAATGCCGTAGGTAAAGAGAGCCTCCAGCCCTGCCTGAGTGCCAAAGCATTGGCGGAGATT GGGGTTAAAATTGAAGCTTTCCCACAACTGGGGGATGGTGAGTGTGCGGATCTTAGCGCTATTCCGCAGGCCAGTGCCGA GTTTCGTTTGAGTGCGCAGCAGTTGTTGATCCGTATCCCGCAGGCAGCCATCACCGACAAAGCGCGTGGCTATGTAGAAC CCAGCCAATGGGATGATGGTATTACGGCGTTGTTACTTAATTACAGTGTCAGTGGTGCGCAAAATAACCCCCGTAATAGC AAAAATAATGATAGCAATAGCCAATATGCCAACCTGCGGCCCGGCTTTAACATTGGCCCGTGGCGACTGAGTAGCTATAT CACCTGGAATCGCAGTAGTGGCCGTCAGGACCAGTGGGACACCGTGTATACCTATGTACAGCGCAATATTATTGCATTGA AGAGTCAGTTGATTTTTGGTGATAGCAATTCGCTGACCGATGTGTTCGATGGTGTGCCATTTCGTGGCGTGCAACTGGCT TCTGATGATGACATGGTGCCCGATAGCTTGAAAGGGTATGCGCCAGTGGTACGTGGTATAGCCCATAGCAATGCTGAAGT GACTATCCGTCAGAATGGTTATGTCGTTTATCAACATTTTGTCGCACCAGGTGCATTTGAAATCACAGATATGTTTCTAA CGGGTACCAGTGGTGATCTCTATGTAACGGTAAAAGAAGCGGATGGCAGCGAACAACTGATTGTGGTGCCTTTTGCTTCC TTACCGGTATTACAGCGGGAAGGGCGACTGAAATATGCACTCACCGGTGGACAATATCGTTCCTACAACAGCCGTATCGA GAGAACTCCCTTTGTGCAAGGCACGGGCATCTATGGATTGCCTTATGGCATAACAATTTATGGTGGTATTCAGGGCGCGA GTCGCTATCAATCTTTAGCTTGCGGCCTGGGAGATAATCTGGGGACGTTGGGTGCGGTATCAGTGGATGTCACACATGCC CAAGCCACCATGCAAAACCAACCACAGAGAAGTGGCCAATCTCTGCGGACTCGATATAGCAAGAATATAGCACAAACAGG AACCAACATTGCCATTGCGGGTTACCGCTACGCAACCGCAGGTTATTACAACTTGCAAGAGACGCTGGATAGTTATCGTA AAGGTCAGAATACCGCCCTGGCAGAGCGTCACCGCAATCGTGCTGAGGCGACCATGACTCAGAGTTTATGGCAGGAAATC GGTTCAGTGTCACTTAGTTTAGTGAATGAGGGTTACTGGAACAGTAATCGACGCCTGCAATCCTACGGAGTGGGCTACAA CAACAGTTGGCACAAGGTTAGCTATGGTGTGAATTACAGCTATAACCTTAATTTTATGGCCAGTAGTGCAGGTAGCGGTA AAAAATATGGAAAAGATCAGGTCATTGCTTTCAATATCAGTGTGCCATTAGCCATTTTACTGGGTAACACTTATGCCAGT TACACCATGAATACCAGCAAGAAGGGGAGTACCACTCATATTGCTGGCCTAAAGGGTACCGCACTGGCTAGTAATAATCT GAGCTGGAGTGCACAGCAAGGTTATGGTAGCCAGAGGCAAGGTAATAGCGGCAATCTGGCTGCGGATTATCGCGGTACCT ATGGTGAAATTAACGCAGGTTATGCCTATGACAATGACATGCAGCGAGTGAACTATGGGGTACAGGGTGGGATAGTGGCG CACAGAGATGGTGTTACCTTTGGTCAACCATTAGGTGAAACTATCGCGCTGGTTAAAGCTCCGGGAGCAAAGGCGGTGGA ACTGAGCAGCCAGAATGGAGTGAAAACCGATTACCGCGGCTATGCCATTGTGCCTTACATCAGTCCTTACCGTAAAAATA AGATAGCACTGAACAGTGCGACGCTTTCGGATGATGTGGAGCTTAACCAGAATACCCAGAATGTGGTGCCGACGCGTGGT GCGATAGTACGAGCCAGCTTTGTTACCCAGATCGGTGGGCGTGCGATGATGACGCTACTGCGCCCTGATGGAGCACCAGT GCCATTTGGTGCCACCGTGAGCGATATGGCTACCAAGGGCCAGGGTTTTATTGTCGGTGATACCGGGCAGGTTTATCTAA CCGGGTTGGCAGACAGCGGCCAATTAATTGTGAAATGGGGCCATGACACCTCGCAGCAGTGCCATGTGGATTATTCCCTC TCTGGAAAAATAGAAACAAATAGCGTTCAGATGCTACACGGACAGTGTGGGTAA Protein sequence : MRAEEHFNSALLEIDNQQQSHTDLSVFEQEPNQASGTYRVDIYINNELLDTRDVVFSMQKNAVGKESLQPCLSAKALAEI GVKIEAFPQLGDGECADLSAIPQASAEFRLSAQQLLIRIPQAAITDKARGYVEPSQWDDGITALLLNYSVSGAQNNPRNS KNNDSNSQYANLRPGFNIGPWRLSSYITWNRSSGRQDQWDTVYTYVQRNIIALKSQLIFGDSNSLTDVFDGVPFRGVQLA SDDDMVPDSLKGYAPVVRGIAHSNAEVTIRQNGYVVYQHFVAPGAFEITDMFLTGTSGDLYVTVKEADGSEQLIVVPFAS LPVLQREGRLKYALTGGQYRSYNSRIERTPFVQGTGIYGLPYGITIYGGIQGASRYQSLACGLGDNLGTLGAVSVDVTHA QATMQNQPQRSGQSLRTRYSKNIAQTGTNIAIAGYRYATAGYYNLQETLDSYRKGQNTALAERHRNRAEATMTQSLWQEI GSVSLSLVNEGYWNSNRRLQSYGVGYNNSWHKVSYGVNYSYNLNFMASSAGSGKKYGKDQVIAFNISVPLAILLGNTYAS YTMNTSKKGSTTHIAGLKGTALASNNLSWSAQQGYGSQRQGNSGNLAADYRGTYGEINAGYAYDNDMQRVNYGVQGGIVA HRDGVTFGQPLGETIALVKAPGAKAVELSSQNGVKTDYRGYAIVPYISPYRKNKIALNSATLSDDVELNQNTQNVVPTRG AIVRASFVTQIGGRAMMTLLRPDGAPVPFGATVSDMATKGQGFIVGDTGQVYLTGLADSGQLIVKWGHDTSQQCHVDYSL SGKIETNSVQMLHGQCG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 1e-146 | 41 |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 3e-143 | 41 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 2e-144 | 41 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 2e-144 | 41 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 5e-146 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Y11_30771 | YP_006006576.1 | type 1 fimbriae anchoring protein FimD | VFG0454 | Protein | 3e-164 | 43 |
| Y11_30771 | YP_006006576.1 | type 1 fimbriae anchoring protein FimD | VFG0446 | Protein | 9e-152 | 43 |
| Y11_30771 | YP_006006576.1 | type 1 fimbriae anchoring protein FimD | VFG0876 | Protein | 3e-154 | 41 |
