Gene Information

Name : Y11_30661 (Y11_30661)
Accession : YP_006006565.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3157625 - 3158752 bp
Length : 1128 bp
Strand : +
Note : -

DNA sequence :
GTGAAGCCGAAAGAGATGACTGATGGGGGAGGGTTATATCTCGAAGTCAGTGCCAGTGGGGCGAAATACTGGCGTATGAA
ATACCGCTATGGTGGCAAAGAGAAGCGCATTGCTTTTGGGGTTTATCCCCATGTATCGCTGGCCGATGCACGTCAAAAAC
GAGAAACGGCGAAGAAGCTTTTAGCCTCCGGAACAGATCCCGCAGAGGTGAAAAAGGCTGATAAGTTAGCGCAGCGGCTT
TCATCGGAAAACTCTTTTGAGGCCATTAGCCGCGAGTGGCATAAAGCTAAAGCGGATCGTTGGTCTTTGGGATATAGGGA
AGAAATCATGAGTACCTTTGAGGCAGATATATTCCCGTATATTGGTAAACGGCCAATTGCAGAAATCACACCGCTGGAAT
TACTTGATGTGCTTCAACGTATCGAAAAGCGCGGAGCCTTAGAAAAAACTCACAAAGTACGTCAGCGCTGTGGGGAAGTA
TTTCGTTATGCCATTATTACCGGCCGTGCCGAATATAATCCCGCCCCTGACCTTGCCAGCGCATTAAGTACGCCAAAGAA
ACAGCACTACCCGTTCCTGTCTGCCGAAGAGATGCCATATTTTATTCGTGACTTAGAGGGTTACACCGGCAGCATCATAA
CCAAGAACGCCGCGAAGATACTTATGTTAACGGGTGTACGAACTAAGGAAATGCGGTTTGCTACTTGGCAGGAAATAGAT
CTTGAGAGCGGCTTATGGGAGATTCCAGCAGAACGAATGAAGATGCGCCGCCCCCATATCGTGCCGCTGTCTACACATGT
TATAGCGCTATTTAAACAGCTATTACCTATCACCGGGCATTACCCCTATATTTTTATTGGACGAAATGACCGTAAAAAGC
CTATAAGTAAAGAAACAGTAAATCAGGTTATTGAATTACTGGGTTATAAAGGCCGTGCGACGGGTCACGGATTTAGACAT
ACCATGTCAACGATATTGCATGAGCAAGGCTATGATAGTGCATGGATAGAGCTACAATTGGCTCACGTTGATAAGAACAG
TATTCGTGGTACTTATAACCATGCGCAGTATCTTGAAAAACGTAGGGATATGTTGCAGTGGTATGCTGACCAAATTTATG
GAGTTTGA

Protein sequence :
MKPKEMTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVSLADARQKRETAKKLLASGTDPAEVKKADKLAQRL
SSENSFEAISREWHKAKADRWSLGYREEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTHKVRQRCGEV
FRYAIITGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGVRTKEMRFATWQEID
LESGLWEIPAERMKMRRPHIVPLSTHVIALFKQLLPITGHYPYIFIGRNDRKKPISKETVNQVIELLGYKGRATGHGFRH
TMSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRRDMLQWYADQIYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int ACU09430.1 integrase Not tested LEE Protein 2e-141 73
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-141 73
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-141 73
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-141 73
int CAC39282.1 integrase Not tested LPA Protein 1e-142 73
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-143 73
int AAD44730.1 Int Not tested SHI-2 Protein 7e-141 73
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 8e-142 73
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 1e-141 73
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 1e-141 73
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 6e-119 64
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-114 57
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-66 42
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 1e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_30661 YP_006006565.1 phage integrase VFG0783 Protein 9e-142 73
Y11_30661 YP_006006565.1 phage integrase VFG0598 Protein 5e-142 73