Gene Information

Name : Y11_30571 (Y11_30571)
Accession : YP_006006556.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3147971 - 3148738 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAACCTTAATAACGTTATCCTGATACGGGTAAACCGACAGCGGAATAATACTCTGGTAGGAACAGCTTTGTTGTT
TGTTACGATGATGAGTGAGGCGTCAATATCTCTGGATAGAACGCGGATTATTTTCAATAGTGCCGATACGTCAGCTAGTG
TCATTTTGCAAAATAAAAGCGAGGTATTGCCTTATCTGGCGCAATCCTGGTTGGAAAATGCCGCTGGGCAGAAAGTAGAT
AGCCCCTTGTCTGCTTTACCCGCGATAACACGAATTGATGTGGGTCAGAAAAGCCTGGTGAGAATTATTTCACTGCCAGA
TATCGAGCAATTAGCCGCTGATCGTGAAACTTTATTCTATTTTAATGTGCGGGAAATTCCCCCGAAAAGTGAAATAACCG
CAGTAGTGCAAATCGCTATCCAAAATAAAATAAAGTTATTTTATCGGCCAGCGGCAATTAAAGCGGATTATAAGAATGTC
TGGCAGGAGAAGTTACAGATCAGGCAGCAAGGAGAAGAGCTTAGAATTCATAACCCCACGCCGTATTACGTCACGTTAGG
GCATTTAAATCGGGATAATCGCGGTAATTTTCCCGGTTTTGACAGTGTTATGATTGCGCCATTCGGTACTGAGTCCGTTA
AGACTCCCGGGTATAATGGCAACGGCTATAGTCTCGGCTATATGGATGATTTTGGTCAGATGATCATTCGCAGCGTGAAC
TGCTCGATAGGCCATTGCCGCATTCAGGCTGTGGAAAAGAAGATATAA

Protein sequence :
MANLNNVILIRVNRQRNNTLVGTALLFVTMMSEASISLDRTRIIFNSADTSASVILQNKSEVLPYLAQSWLENAAGQKVD
SPLSALPAITRIDVGQKSLVRIISLPDIEQLAADRETLFYFNVREIPPKSEITAVVQIAIQNKIKLFYRPAAIKADYKNV
WQEKLQIRQQGEELRIHNPTPYYVTLGHLNRDNRGNFPGFDSVMIAPFGTESVKTPGYNGNGYSLGYMDDFGQMIIRSVN
CSIGHCRIQAVEKKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-41 45
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 2e-48 43
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-50 43
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 2e-50 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-50 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-50 42
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-50 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_30571 YP_006006556.1 putative fimbrial chaperone VFG0885 Protein 7e-42 45
Y11_30571 YP_006006556.1 putative fimbrial chaperone VFG1547 Protein 7e-51 43
Y11_30571 YP_006006556.1 putative fimbrial chaperone VFG0896 Protein 9e-51 42