Gene Information

Name : Y11_28611 (Y11_28611)
Accession : YP_006006360.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2930569 - 2931591 bp
Length : 1023 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAAACGCAAAGGCCGACGCGCCAAGGCAATAGCAAAAAAAACCGATCAGGCGATGCACGCTTTTACCTTCGGTGA
ACCCTCAGCGGTACTGGATCGCCGTGATATTCTCGACTACGCCGAGTGCATCAGTAACGGCAAATGGTTAGAGCCACCGG
TGAGCTTTGCCGGACTGGCAAAAAGCCTACGCGCTGCCGTGCATCACAGCTCGCCGATATATGTTAAGCGCAATATTCTT
GCCAGCACCTTTATCCCGCATCCGTTATTGAGTCAGCAGGTATTTAGCCGCTATGTGCTGGATTATTTAGTCTTTGGCAA
TGCTTTCTTAGAAAAGCGATTTAATCAGTTAGGGGAAGTATTACGGCTGGAGTGCTCACCGGCGAAATATACCCGGCGGG
GCATCGAGGAAGATGTTTATTGGTTCGTGCAGTCGTTCAAAGAGCCGCACCGTTTTGCACCGCGTTCGGTATTCCATTTG
ATTGAACCGGATATTAATCAAGAGCTGTACGGCCTACCGGAATATATGAGTTCGCTGAACTCAGCCTGGCTTAATGAAGC
TGCCACGCTATTTCGCCGCAAGTATTATCAGAACGGCGCGCACGCCGGTTACATTATGTATGTGACTGATGCGGCACAAA
GTAACACCGATGTGGAAGCACTGCGCGAAGCGATGCGCAGCTCGAAAGGATTGGGGAATTTTAAAAATCTGTTTTTCTAC
GCCCCGAATGGCAAGCCGGACGGGATCAAGATAGTGCCGCTGAGTGAAGTGGCGACAAAAGATGATTTCTTCAACATCAA
GAATGCCACCCGCGACGACCTGCTCAGTGCGCACCGCGTGCCACCCCAGATGATGGGCGTGCTCCCACATAATACCGGCG
GTTTCGGCGATGTGGTCAAAGCCGCACAGGTGTTTGTGCGTAACGAACTGACGCCGTTACAGGAGCGAATCAAAGAGGTG
AACAACTGGCTAGGCCAAGAGGTGGTACGCTTTAAACCTTACGAACTACCGAAGAACAAGTAA

Protein sequence : 
MSKRKGRRAKAIAKKTDQAMHAFTFGEPSAVLDRRDILDYAECISNGKWLEPPVSFAGLAKSLRAAVHHSSPIYVKRNIL
ASTFIPHPLLSQQVFSRYVLDYLVFGNAFLEKRFNQLGEVLRLECSPAKYTRRGIEEDVYWFVQSFKEPHRFAPRSVFHL
IEPDINQELYGLPEYMSSLNSAWLNEAATLFRRKYYQNGAHAGYIMYVTDAAQSNTDVEALREAMRSSKGLGNFKNLFFY
APNGKPDGIKIVPLSEVATKDDFFNIKNATRDDLLSAHRVPPQMMGVLPHNTGGFGDVVKAAQVFVRNELTPLQERIKEV
NNWLGQEVVRFKPYELPKNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 1e-110 68
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 1e-110 68
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 4e-81 54