Gene Information

Name : Y11_25431 (Y11_25431)
Accession : YP_006006042.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2574396 - 2575433 bp
Length : 1038 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAAGCGCAAAGGCCGCAAGGCATTAAGTCGCCCGGCAACCAATCACACCGCCAGTCAACAACAACCGGTCGAGGC
GTTCACCTTTGGCGAACCCTCCGCCGTGCTGGATAAACGGGAAATTCTGGATTACATCGAATGCACCGGCAACGGTAAAT
GGTATGACCCGCCGATTAGCTTTGATGGGCTGGCGCGCAGCTTCCGGGCGGCGGTGCATCACAGCTCGCCGCTGTATGTG
AAGCGCAATATTCTGGCAAGTACCTTTATTCCACATTCGATGCTCAGTCAGCAATCATTCAGCCGCTATGCGCTGGATTA
TCTGGTGTTCGGCAATGCGTTTTTAGAGGTTCGCCGCAATCAACTTGGCGCGCCACTGCGCCTCGACCCCAGCCCGGCCA
AGTACACCCGCCGGGGACTGGAAAAAGATTGCTATTGGTTTGTGCAGAACTGGAAAAATGAACACCTGTTTGAAGCTGGT
AGCATTTTCCACCTGATAGAACCCGATATCAATCAGGAACTTTATGGCCTGCCGGAATATCTCAGCGGCTTAAATTCGGC
TTGGCTCAATGAAGCGGCCACACTCTTCCGCCGCAAGTATTACCAGAATGGCGCTCACGCGGGATACATCCTGTATATGA
CCGATGCGGCGCAAAGTAGCAGCGATATTGAGGCGATGCGTAAAGCGATGCGCGACACCAAAGGGTTAGGCAATTTTCGC
AACCTGTTTATGTACGCGCCCAACGGTAAAAAAGACGGCATCCAGATTTTACCGTTGAGCGAAGTCGCCACCAAAGATGA
CTTTTTTAATATCAAGAACGCCACCCGCGACGACCTGCTCAGTGTGCACCGGGTGCCACCGCAGATGATGGGGATTATTC
CCAACAATACTGGCGGTTTCGGTGACGTGGCGAAAGCCTCACAAGTCTTTGTCCGCAATGAGTTAACGCCGTTGCAAGAA
CGATTGAAAGAGGTGAATGACTGGATAGGGCAAGAGGTGATCCGGTTCAAGCCTTATGAACTGATAAGCGAGGATTGA

Protein sequence : 
MSKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPISFDGLARSFRAAVHHSSPLYV
KRNILASTFIPHSMLSQQSFSRYALDYLVFGNAFLEVRRNQLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFEAG
SIFHLIEPDINQELYGLPEYLSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFR
NLFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGFGDVAKASQVFVRNELTPLQE
RLKEVNDWIGQEVIRFKPYELISED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 1e-115 66
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 1e-115 66
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 6e-90 53