Gene Information

Name : Y11_24391 (Y11_24391)
Accession : YP_006005938.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2480036 - 2480353 bp
Length : 318 bp
Strand : +
Note : -

DNA sequence :
ATGCTCAATACTCGTCGGCCTAAACGCACATTTTCCCCGGTGTTCAAACTCGAAGCTGTCGAGCAGGTTGTTAAATACCA
GCGCGATGCCAGAGAAATCGCACTGGCGCTCGAACTTGACCCTGCTCATTTGCGCAAGTGGATACGGCTGTATAAGCGGG
AACTCCAGGGAATAGAGCCAGTTGGCAATGCCATCACACCCGAACAACGCGAAATTCAGCAGCTTAAAAACCAAATAAAA
CGCCTTGAAATGGAAAAAGAAATACTAAAGCAGGCTACCGTGCTGATGAGCGAAATCCCCAAAAAGCTATCGCGCTAA

Protein sequence :
MLNTRRPKRTFSPVFKLEAVEQVVKYQRDAREIALALELDPAHLRKWIRLYKRELQGIEPVGNAITPEQREIQQLKNQIK
RLEMEKEILKQATVLMSEIPKKLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 3e-37 84
unnamed CAD33780.1 putative transposase Not tested PAI I 536 Protein 1e-37 80
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-12 42
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-12 42
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-12 42
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 9e-12 42
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 9e-12 42
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-12 42
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 6e-12 42
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-12 42
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 9e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_24391 YP_006005938.1 putative transposase VFG1566 Protein 1e-37 84
Y11_24391 YP_006005938.1 putative transposase VFG1521 Protein 5e-38 80
Y11_24391 YP_006005938.1 putative transposase VFG1123 Protein 2e-12 42