Gene Information

Name : Y11_22641 (Y11_22641)
Accession : YP_006005763.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2313641 - 2314495 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCTGCGGGTCAGTGCCCGTTCAGATAAGCGAAAAAGTGAGTTACCGCCAGGTTCTGACAACATTAATTCGAGAGA
AAAAGTAATGAATTCGAAGGAAAAAGTAATGAAATTGAATAACAAATTACGTATCACCACCATTTTGGTGGCGGCACTGA
TGACTCAGCAAGCAACAGCAGCGATTGCACTGGACAGAACCCGGGCCATTCTTAATGGTGGCGATAAGTCGATCAGCTTG
AATATCAGCAACCAGAATAAGGAATTACCTTATCTGGCGCAGGGATGGATTGAAGATGAGCAGGGTAACAAAATCAATTC
ACCGTTGACGGTCGTACCTCCGGTTCAGCGGGTAGAACCGGGCGCGATGAGCCAGTTAAAAATACAAAGTTTGCCAGCGG
TGAATCAGTTGGCGCAAGACCGGGAAACCTTGTTCTATTTTAACCTGCGCGAAATCCCACCACGGTCGGACAAGCCCAAT
ACTTTGCAGATTGCTTTGCAAACGCGCATCAAACTTTTCTACCGTCCTGCGGGTATCGTGCCACAAAAGGCCGATATGTC
GACACCTTGGCAGGAGAAGTTACAGCTGACTCGCCAGGGCGATCGCTATCAGGTTAATAACCCAACGCCATATTACATCA
CGCTGGTCGATGCCAGTGAGAGCAAAACTGGCAAAACGGCAGCAGGTTTCAAACCGCTGATGATCGCACCAAAAGCGCAG
GGCATATTGGATGTGAGCGCTGCGGCATTAGGTAGCAAGCCAGTGCTGACCTATGTCAACGATTTCGGCGGTCGTCCAAA
ACTGATCTTCGGCTGTTCGGGTGGCACGTGTTCTGTGGTGGAAAGTATCAAGTAA

Protein sequence : 
MNLRVSARSDKRKSELPPGSDNINSREKVMNSKEKVMKLNNKLRITTILVAALMTQQATAAIALDRTRAILNGGDKSISL
NISNQNKELPYLAQGWIEDEQGNKINSPLTVVPPVQRVEPGAMSQLKIQSLPAVNQLAQDRETLFYFNLREIPPRSDKPN
TLQIALQTRIKLFYRPAGIVPQKADMSTPWQEKLQLTRQGDRYQVNNPTPYYITLVDASESKTGKTAAGFKPLMIAPKAQ
GILDVSAAALGSKPVLTYVNDFGGRPKLIFGCSGGTCSVVESIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-51 49
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 7e-60 49
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-58 49
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-58 49
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-58 49
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 2e-58 49
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 1e-58 49
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 1e-58 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_22641 YP_006005763.1 periplasmic fimbrial chaperone VFG0885 Protein 8e-52 49
Y11_22641 YP_006005763.1 periplasmic fimbrial chaperone VFG1547 Protein 6e-59 49
Y11_22641 YP_006005763.1 periplasmic fimbrial chaperone VFG0896 Protein 8e-59 49