Gene Information

Name : Y11_15761 (Y11_15761)
Accession : YP_006005075.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : clpb protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1579369 - 1582038 bp
Length : 2670 bp
Strand : -
Note : -

DNA sequence :
GTGGCTATTACAAGGAAAAATCTTTTCGGCAAACTGGATGCCACTCTTTTCAAAGGTATTGAAAGTGCGACAACGATTTG
TAAATTGCGTGGCAACCCTTATGTAGAGTTGATTCATTGGGTGAACCAACTTTGGCATCAAGAAGATAACGATCTTAAAC
ATATTGTTCGCTATTTTGCTGTCGACGTAGATGCTTTTGAACGTGGCCTGGCTCAAGCACTTGCCCGTTTGCCCGTCGGT
GCGACCAGCATTTCAGATTTTTCATACCATATCGAATTAGCAATCGAACGGGCATGGGTGTACGCCAGCCTGGAGTGTTT
AGATACACGTATTCGCAGCGGACATTTGTTGCTGGCAATGCTAACCAATATGGAGTTGCGCCGGGCACTGTTGGCTATTG
CTCCAGAAATGGAAAAAATTCCACTGGAGCATTTGAGCAGCGATTTTAACTTTATTACGCAGGCATCGCCGGAAACCAAT
GAAGCGGCCACCGATGGTAGCCCAATGTATGACGGCGCATTACCGGGTGAAGCCAGCAATGCTATTAACGGCAAAAGTAC
CGCGACATTGGCGCAGTACACCACGGATCTGACTGCATTAGCTCGTGAAGGCAAGATAGACCCGGTACTGGGGCGCAACC
ATGAAATCAGTACGATGGTGGATATTTTACTGCGTCGTCGACAAAACAACCCGTTGCTCACCGGTGAAGCTGGCGTGGGT
AAAACAGCCGTAGTTGAGGGTCTGGCGCTGGCCATTGTCGCGGGTGAAATGCCTCCAGCACTGAGTCAGGTGAGTCTGCT
AACCCTGGATGTTGTGGCTCTTTCGGCGGGTGCCAGCATGAAAGGCGAGTTTGAAGCACGCCTGAAGAATGTTTTAGACG
AAGCAATGGCTTCACCAACTCCTGTCATCCTGTTTATAGATGAAGTTCACACTCTGGTCGGTGCGGGGGGGAATGCAGGA
ACCGGTGATGCAGCTAATTTACTCAAACCGGCACTGGCGCGCGGTCAGTTGCGCACCATTGGCGCGACAACCTGGAGTGA
GTTTAAACGCCATATTGAAAAGGATCCGGCGCTAACTCGTCGTTTCCAGGTACTTCAGGTCGATGAACCTGATGAAGATA
CTGCTATTTCGATGCTGCGTGGATTGACTCCGGCGTTAGAGAAGCACCACGGCGTATGGATCATGGATGAAGCCTTGCAA
GCTGCGGTGCGATTATCGCATCGTTATATCCCTGCTCGCCAGTTACCGGATAAAGCGATCAGCTTGCTTGACACCGCTTG
TGCACGTGTTGCCGTCGCACAATTCTCACAGCCGGCAGAATTGCAGCAATTGACTTTCCAGAGTGAAACCGCGCAAACCG
AGTTGTCATCGCTGGAAAAAGCCCGACATTTCGGCAAAGGGCAGGACGAGCGCGCAGCACTGTTAGAAGCCACGATTGCT
CAGCACTCGGAAGCGGCAAACAAACTTGAACAACGTTGGCAGGCAGAGCGTGACTTGGTCACCGCTATTACAGCTACGCG
AACGGCGCTGTATGAACTGGTGTCGCAACCCACGCCTGATGAAGAAAAACGCCAGCAGTATCAGCAGCAATTGGCGCAAC
TTGAAGAGCAATTATTGCTTATTCGCAGTGCGCAGCCTTTGGTACAAGCTGAGGTTAATGCAACCGTGATCGCCAACATT
GTTGCGGATTGGACCGGGATTCAAGTCGGACAAATGCTCAAAGACGATATTCGTGCCGTGATGGAGCTGCCGCAACGCCT
CGAAGAGCGAGTGATTGGTCAGCCGCATGCGTTAGTCCAGTTGAGCGAAAATATTATGACTGCACGTGCGGGGATGGCAG
ACCCAAGGAAACCGTTGGGTGTCTTTATGTTGGTTGGCCCTTCCGGGGTGGGTAAAACAGAAACGGCATTGGCCATTGCG
GAAAGTATGTATGGTGGTGAGCAAAACCTTATCACGATTAATATGAGCGAATACCAAGAGTCACATACGGTTTCCTCATT
AAAAGGCTCGCCACCGGGCTACGTGGGATATGGCGAAGGTGGTGTATTAACCGAGGCAGTACGGCGTAAACCTTATAGTG
TTGTGCTATTAGATGAAATTGAAAAAGCACATTCAGATGTCCATGAACTGTTCTTCCAGGTATTTGATAAAGGCCAGATG
GAAGATGGCGAAGGGCGGTTTATTGATTTTAAGAACACTATTTTGCTGTTAACCAGCAATGTGGGTAGCGAATTATTAAG
TAACTTATTTGCTGATCCGGATACTGCTCCCGATCAAGATGGAATATTAAGTGCGTTGCAACCTGAATTGCTGAAAGTAT
TCCCCGCCGCATTTTTGGGTCGCGTCACTGTGATTCCTTATTTGCCGCTCCAGCAGAGCGCGTTGCAGCATATTGTTCGA
TTACATTTAGATCGTATCGGCCAGCGTTTACAGTCTCAGCATCAGCTGACGTTGCAATACAGTGATGTGGTCGTTGACGA
TGTAGTTAGCCGCTGCTCAGTAGCAGAAACCGGCGCCCGTATGCTTATTCGTTATATTGAACAGAATATTACACCTGAAA
TTGGCAAATTTATTTTACGTGACCACGATGCGATACCTAATCAGATCGTGTTCGTCGATAAAGTTGAAAATAAATTTACT
ATTTCTGTACTGAATGAAAAAGATAAATAA

Protein sequence :
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELIHWVNQLWHQEDNDLKHIVRYFAVDVDAFERGLAQALARLPVG
ATSISDFSYHIELAIERAWVYASLECLDTRIRSGHLLLAMLTNMELRRALLAIAPEMEKIPLEHLSSDFNFITQASPETN
EAATDGSPMYDGALPGEASNAINGKSTATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFIDEVHTLVGAGGNAG
TGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQ
AAVRLSHRYIPARQLPDKAISLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKARHFGKGQDERAALLEATIA
QHSEAANKLEQRWQAERDLVTAITATRTALYELVSQPTPDEEKRQQYQQQLAQLEEQLLLIRSAQPLVQAEVNATVIANI
VADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIA
ESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRVTVIPYLPLQQSALQHIVR
LHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVAETGARMLIRYIEQNITPEIGKFILRDHDAIPNQIVFVDKVENKFT
ISVLNEKDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 60
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-125 46
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-125 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_15761 YP_006005075.1 clpb protein VFG2076 Protein 0.0 54
Y11_15761 YP_006005075.1 clpb protein VFG2084 Protein 1e-139 44