Gene Information

Name : STND_0829 (STND_0829)
Accession : YP_006002391.1
Strain : Streptococcus thermophilus ND03
Genome accession: NC_017563
Putative virulence/resistance : Resistance
Product : Cation transporting ATPase, copper transport
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 789519 - 791681 bp
Length : 2163 bp
Strand : -
Note : -

DNA sequence :
ATGTCAAATAAAACTCATTTGTCTAATTACGAAGAAATGATGTCTGAGCATCATCACAATCATGAAATGGTGGATATGAA
GCACGAAAATCATGAGATGCACAACATGCACAATATGGATAATATGCATGATATGGACAATATGCACAACATGCACAATA
TGGATAATATGCATGATATGCATGATATGGATAATATGCATGATATGGATAATATGCATGATATGATGAATCATGGAGGA
CACATGATGCATATGGGTGATATGAGTAAAAAGCTCAAAGTGGCTATCATTCTAATGATTCCGCTTCTACTCATTTCACC
AATCGCTGGCTTTACTATCCTTAAATTCCCCGGAAGTGAAATTTTGCAACTTATCCTTGGTACAATTATCTTCTTTTACT
CTGGGACTCCTTTTTTTAGAGGAGCAAAAGGTGAATTAAAAAGCCGTAAGCCAGCCATGATGATGCTGATTACAATGGGA
ATTTCCGTTGCCTATGCTTATTCTGTTTATGCCACAATTATGAGTCTTTACGGACATATGGGCATGAACTTCTGGTTTGA
ACTGGCAACTTTAATTGTCATTATGTTGATTGGTCACCTGATTGAGATGAAAGCAATCATGGGTGCTGGCGATGCATTGA
AAGATTTAGCAAGCCTTGTTCCCAAAAAAGCTCACTTAAAAAGTGGGAAGGATGTGGAGCTTTCAGAACTAAAAGTTGGC
GATTTGCTTTTAGTGAAAGAAAATGAAAAAATTCCTGCAGATGGCCTTATATTAAGTGAAGCGCTCGTTGATGAGTCAAT
GATTACTGGTGAAAGCCGAGCAGTCAATAAAAAACCAAATGACCTTGTTTATGGTGGTTCCCTCAATCAAAACCAACCAT
TTGAGATGAAAGTCACAACCCTTGGAAAAGATTCATTTCTCAATCAAGTGGCTGAATTAGTCAAGAAAGCCCAAGCTCAA
AAATCTAATTTGGAAAATATGGCTGACAGAGTGGCTGGTTACCTTTTCTATGCTGCACTTATTGTCGGTATCTTCTCATT
AATTTTTTGGACAATTAGTTCTAACTTTAGTTTTGCTCTACTTCTTGCGGTTTCTGTTTTTGTAATTGCATGTCCACACG
CTTTAGGTCTTGCGGTTCCACTTGTTGTTTCTCGCTTAACCAGTATTTCTGCTAAAAATGGTTTATTAATTCAAAACAGA
ACCTCTTTGGAAAAAATAAATACAATTAAATATGCCTTAATGGATAAAACAGGAACATTAACTGACGGTAAGTTTATTGT
CCGTGATGTTATTGATTTTACTGATGAAACAGACATTCTCCAAATCATGGCAGCACTTGAAGGAAGTTCCACTCACCCGA
TTGCTCAATCAATCGTTTCAGCTGCTAAACCTCTTAAAAATCTAAAAGTTGAAGCGGTTGAAAATATTCCAGGAGTTGGA
ATTAAAGGGCAAGTTAATCAAAACTTTTATCAAATTGTTAACTATAAATATCTTCGTGAAAATCAACTTTCTTATGATGA
ACAAAAGATTGCTCAATATTTAGATTTAGGTTTAACTTTATCTTTCCTAATCAATGAACAACAAGATGTTTTAGGATTTA
TTGCCTTAGGAGATTCTCCTAAAGCAGACGCGAAAGCCTTTATTAATGGTTTATTAGCCCAAGGAATTACCCCTGTTATG
CTCACGGGTGATAATAAAGAAACTGCTCAAAAAATTGCTAGTGCACTAAATATTCCCGAATTTAGAGCGGAATTAAAACC
TGAAGATAAAGCAGAAATTGTGAAAGAATACCAAAAGAAAGCCGGCGTTCTTTTCATTGGTGATGGTGTCAATGATGCCC
CAGCCCTTGCAACTGCTACAATTGGTTTTGCGATTGGAGCAGGAACTTCGGTTGCTATCAGTACCGCTGATGTCGTCCTA
GTTAACTCCAATCCAAGTGACGTCTTGGATATGATTAACATCTCCAAACGCATGCTTAGAAAAATGAAACAAAACCTCTG
GTTTGGAGCAGGCTATAACATTATTGCTATTCCTGTTGCAGCGGGTATTCTTTATCCATTTACAGGATTTTATATTGACC
CTCTCATTGCAGCAGTCCTGATGTCAATCTCAACCGTGATCGTCTCAATCAACGCGATGGGATTGAGGTATGATAAAAAA
TAG

Protein sequence :
MSNKTHLSNYEEMMSEHHHNHEMVDMKHENHEMHNMHNMDNMHDMDNMHNMHNMDNMHDMHDMDNMHDMDNMHDMMNHGG
HMMHMGDMSKKLKVAIILMIPLLLISPIAGFTILKFPGSEILQLILGTIIFFYSGTPFFRGAKGELKSRKPAMMMLITMG
ISVAYAYSVYATIMSLYGHMGMNFWFELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKSGKDVELSELKVG
DLLLVKENEKIPADGLILSEALVDESMITGESRAVNKKPNDLVYGGSLNQNQPFEMKVTTLGKDSFLNQVAELVKKAQAQ
KSNLENMADRVAGYLFYAALIVGIFSLIFWTISSNFSFALLLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNR
TSLEKINTIKYALMDKTGTLTDGKFIVRDVIDFTDETDILQIMAALEGSSTHPIAQSIVSAAKPLKNLKVEAVENIPGVG
IKGQVNQNFYQIVNYKYLRENQLSYDEQKIAQYLDLGLTLSFLINEQQDVLGFIALGDSPKADAKAFINGLLAQGITPVM
LTGDNKETAQKIASALNIPEFRAELKPEDKAEIVKEYQKKAGVLFIGDGVNDAPALATATIGFAIGAGTSVAISTADVVL
VNSNPSDVLDMINISKRMLRKMKQNLWFGAGYNIIAIPVAAGILYPFTGFYIDPLIAAVLMSISTVIVSINAMGLRYDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-101 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STND_0829 YP_006002391.1 Cation transporting ATPase, copper transport BAC0079 Protein 2e-119 48
STND_0829 YP_006002391.1 Cation transporting ATPase, copper transport BAC0629 Protein 1e-107 46
STND_0829 YP_006002391.1 Cation transporting ATPase, copper transport BAC0383 Protein 2e-111 46