Gene Information

Name : STND_0276 (STND_0276)
Accession : YP_006001848.1
Strain : Streptococcus thermophilus ND03
Genome accession: NC_017563
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 271611 - 273329 bp
Length : 1719 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTTAAAATGGATCGTGAAGAGTATGCTCAACACTATGGACCAACTGTAGGGGATAGCGTACGTCTTGGAGATAC
CAATCTTTTTGCAACCATTGAAAAAGACTTTACTGTTTATGGACAGGAATCTAAGTTCGGTGGCGGTAAAGTTTTGCGTG
ATGGTATGGGTGTTAGTGCTACGGAAACACGTGACAATCCATCAGTTGTTGATACCATTATTACAGGTGCAACCATCATT
GACTATACAGGTATTATTAAAGCAGATATCGGTATTCGTGATGGTAAGATTGTTGCTATTGGTCGCGGTGGTAACCCAGA
TACAATGGACAATGTGGACTTTGTTGTGGGTGCTAGTACAGAAGCCATTGCTGCAGAAGGTTTGATTGTGACTGCTGGTG
GTATTGACCTCCACGTACATTATATTTCTGCTGACCTTCCTGAATTTGGTATGGATAATGGAATTACGACCCTCTTTGGT
GGTGGTACTGGTCCCGCTGACGGTAGTAATGCAACAACATGTACACCTGGTAAATTCCATATTACTCGTATGTTGCAAGC
TGTTGATGATATGCCTGCTAACTTTGGTTTCCTTGCCAAAGGTGTTGGTTCTGAGACTGAAGTGGTTGAAGAGCAAATTA
AAGCTGGTGCAGCAGGAATTAAGACACACGAGGACTGGGGTGCGACTTACGCAGGAATTGATAATTCCCTTAAAGTTGCG
GATAAATACGATGTTTCTTTTGCGGTCCACACCGACTCTTTGAATGAGGGTGGATTTATGGAAAATACTTTGGAATCTTT
CCAAGGTCGTACCGTTCATACCTTCCATACCGAAGGTTCTGGTGGTGGGCACGCTCCAGATATTATGGTTTTTGCAGGTA
AGGAAAATATTTTGCCATCATCAACTAACCCAACTAACCCATATACTACAAATGCTATTGGTGAGTTGTTAGATATGGTT
ATGGTTTGTCACCACTTGGATCCAAAAATCCCAGAAGACGTATCTTTTGCCGAATCACGTGTTCGTAAACAAACTGTGGC
TGCAGAAGATGTTCTTCATGATATGGGAGCCCTTAGTATCATGACTTCAGACGCCATGGCAATGGGACGTGTCGGTGAAG
TAGTAATGCGTTGTTGGCAACTAGCTGATAAGATGAAGGCTCAGCGTGGTCCACTTGAAGGAGATTCAGAGTTTAACGAT
AATAACCGTATTAAACGTTACGTGGCTAAATATACAATTAACCCTGCCATCACCAATGGTATTGCAGACTATATCGGTTC
TGTAGAAGTTGGTAAATTTGCAGATTTGGTTATCTGGGAACCAGCACAATTTGGTGCAAAACCTAAGTTGGTGCTTAAGG
GTGGTATGTTAACTTATGGTGTTATGGGTGACGCTGGCTCAAGTCTTCCAACACCTCAACCACGTATCATGCGTAAATTA
TATGGTGCTTATGGTCAAGCGGTTCATAAAACAAATATTACATTTGTCTCTCAATATGCTTATGATCATGGTATCAAAGA
AGAAATTGGTTTGAATAAGATTGTTCTTCCTGTTAAGAATACGCGTAACTTGACTAAGCGTGATATGAAGCTTAATGACT
ACGCTCCAAAAACAATCCGTATCGATCCACAGACCTTTGATGTCTTTATTGATGATGAGTTGGTTACTTGTGAGCCAATC
CATACGACATCATTGTCTCAACGTTATTTCTTGTTCTAA

Protein sequence :
MSFKMDREEYAQHYGPTVGDSVRLGDTNLFATIEKDFTVYGQESKFGGGKVLRDGMGVSATETRDNPSVVDTIITGATII
DYTGIIKADIGIRDGKIVAIGRGGNPDTMDNVDFVVGASTEAIAAEGLIVTAGGIDLHVHYISADLPEFGMDNGITTLFG
GGTGPADGSNATTCTPGKFHITRMLQAVDDMPANFGFLAKGVGSETEVVEEQIKAGAAGIKTHEDWGATYAGIDNSLKVA
DKYDVSFAVHTDSLNEGGFMENTLESFQGRTVHTFHTEGSGGGHAPDIMVFAGKENILPSSTNPTNPYTTNAIGELLDMV
MVCHHLDPKIPEDVSFAESRVRKQTVAAEDVLHDMGALSIMTSDAMAMGRVGEVVMRCWQLADKMKAQRGPLEGDSEFND
NNRIKRYVAKYTINPAITNGIADYIGSVEVGKFADLVIWEPAQFGAKPKLVLKGGMLTYGVMGDAGSSLPTPQPRIMRKL
YGAYGQAVHKTNITFVSQYAYDHGIKEEIGLNKIVLPVKNTRNLTKRDMKLNDYAPKTIRIDPQTFDVFIDDELVTCEPI
HTTSLSQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-153 58
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-153 58
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-153 58
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-151 58
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-148 56
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-148 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STND_0276 YP_006001848.1 urease subunit alpha VFG0270 Protein 4e-145 58