Gene Information

Name : STND_0017 (STND_0017)
Accession : YP_006001596.1
Strain : Streptococcus thermophilus ND03
Genome accession: NC_017563
Putative virulence/resistance : Unknown
Product : IS3-Spn1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 16922 - 17410 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAAGTGCTACACAGATGTGACAGAGTTTGCCATTCCCAATAGCACACATAAATTGTATTTATCGCCTGTTTTAGA
TGGTTTCAACAGCGAAATTATCGCTTATAATCTCTCAACTTCACCAAACTTAGAACAAGTGAAATCTATGTTAGACCAGT
CCTTCACAGAGGAGCATTATGAAAATACAATTCTCCATAGTGACCAAGGTTGGCAATACCAACATCAGTATTATCATCAA
TTTTTAGAGGATAAAGGGATCAAACAGTCCATGTCACGTAAGGGAAATAGTCCAGACAATGGTATGATGGAGTCTTTCTT
TGGCATTCTTAAGTCTGAGATGTTTTATGGTTACGAGAAGATGTTTCACTCACTTGAGCAATTGGAACAAGCTATTGTAG
ACTATATTGATTATTACAATAACAAACTAATCAAGGTAAAACTAAAAGGACTCATTTCTGTGCAATACAGAACTAAGTCC
TTTGTGTAA

Protein sequence :
MEKCYTDVTEFAIPNSTHKLYLSPVLDGFNSEIIAYNLSTSPNLEQVKSMLDQSFTEEHYENTILHSDQGWQYQHQYYHQ
FLEDKGIKQSMSRKGNSPDNGMMESFFGILKSEMFYGYEKMFHSLEQLEQAIVDYIDYYNNKLIKVKLKGLISVQYRTKS
FV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp NP_370590.1 transposase Not tested Type-II SCCmec Protein 7e-09 41
SA0062 NP_373302.1 transposase Not tested Type-II SCCmec Protein 7e-09 41
CDC7B_2064 YP_005163505.1 transposase-like protein Not tested Not named Protein 7e-19 41
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 2e-14 41