Gene Information

Name : XFLM_04425 (XFLM_04425)
Accession : YP_006000219.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 934951 - 935613 bp
Length : 663 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
ATGACTATTAAGATTTTTCTGATTGATGATCATACTCTCGTGCGTGTTGGCATGAAGATGATCTTATCCAATGAATTAGA
TCTCGAAGTGATAGGGGAAGCGGAGACAGGGGAGGCGGCTTTACCACAGATCCGTGAGCTACGCCCGAATGTCGTATTGT
GTGACATGCATCTCCCTGGGGTGAGTGGGCTGGAGATTACAGAAAAATTGGTGAAAGGGAATTATGGTAGCCGTGTAATT
ATTGTTTCGGTGTTGGAAGACGGCCCATTGCCGAAGCGACTGTTAGAGGCTGGAGCTTCTGGTTATGTTGGTAAGGGCGG
TGATGCTAATGAGTTGCTGCGTGCTATCCGTGAAGTGGCTTTAGGGAAGCGCTATCTTGGTAACAGCATTGCGCAGAATT
TGGTGTTGTCAAGCCTTGAAGGAGGATGTTCACCTTTTGATGTTTTGTCACCGCGTGAGTTGGAAATTGCCTTGTTGTTA
ATCCAAGGTCTGAGTCAGGGGGCTATTGCTAAGCGGTTGTGTCTCAGTCCTAAGACAATCAACACTCATAAAGTGCGTTT
GTTCGCTAAAGTTGATGTTCGAGATACCATTGCTCTGGCTCGGTTGGCTATTCAGTACGGGGTGAGTACTCCGGAGAAAT
ATAGTTTAGATAAAACGATCTGA

Protein sequence :
MTIKIFLIDDHTLVRVGMKMILSNELDLEVIGEAETGEAALPQIRELRPNVVLCDMHLPGVSGLEITEKLVKGNYGSRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDANELLRAIREVALGKRYLGNSIAQNLVLSSLEGGCSPFDVLSPRELEIALLL
IQGLSQGAIAKRLCLSPKTINTHKVRLFAKVDVRDTIALARLAIQYGVSTPEKYSLDKTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-37 42
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XFLM_04425 YP_006000219.1 two component LuxR family transcriptional regulator VFG1889 Protein 2e-39 43