Gene Information

Name : XFLM_03095 (XFLM_03095)
Accession : YP_005999980.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 640831 - 641925 bp
Length : 1095 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGAGCGCATTTTCCGCGGATGATCACCGTCACATGGAACGGGCCTTGTGTTTGGCTGAGCGTGGTGCTTACACGACGCG
TCCTAACCCAATGGTGGGTTGTGTGATTGTGCGTGATGGTGAAGTAGTGGGAGAGGGTTGGCACCAGCGTGCTGGCGATC
CGCATGCTGAGGTATTTGCATTGTGTGCGGCTGGAGACCGCGCACGAGGTGCAACGGCTTACGTCACGTTGGAGCCGTGT
GCGCACTCGGGGCGTACTCCGCCGTGTGCGATGGCGTTGATTGATGCCGGAGTGAGACGGGTGGTGGCGGCGATGGTCGA
TCCATTTCCGTTAGTCAATGGTGGGGGAGTCACTCTGTTACGTGCGGCTGGGGTGACGGTTGAGCATGGTTTGATGGAGG
CGCAGGCGCGCGCACTCAACCGTGGCTTTCTGTCGCGGGTGGAGCGTGGTCGGCCATGGGTGCGGATCAAGCTTGGTAGC
AGTTTGGATGGGCGTACCGCGTTGGCTAGTGGCGAATCCAAGTGGATTACCGGGGAGGCGGCACGTGCTGATGTGCAGCG
TTGGCGCGCGCGCGCTAGCGCGATTTTGACGGGGGCTGGGACGGTGCTTGCCGATGATCCGGCGTTAACGGTGCGCCTGG
GTGGGGAGGAGGGAGCGTTTTTGCCGCCGTTGCGGGTGGTGCTTGATTCTAGCTTGCGTTCACTTAGTTGCGTGAAGGTG
CGTGACGGTACTGCACCAACGTTGTATCTGCATGGTTTTGGGGTCACGTCCCCTGTGTTGCAACACGTCGATTTTTCCGA
GGTTCAGCAACGTGATGCTGGGCTTGATCTGGAGGCTGTGTTACGCCTGTTGGGTGAGCGTGGCATCAATGAGGTGCAGG
TTGAGGCTGGGGCGACGTTATGCGGGGCCTTGCTGCACGCTGGGTTGGTGGATGAGTTGCTGATTTATATTGCACCGTTG
TTGCTGGGTGATACGGCACGGCCATTACTGGCTGGATTGGATATCGGGCGCATGGATCAGTGCATTGGTTTGAAGGTGCT
GGAGGTCGCTCAGGTCGGCAATGATCTGCGATTGTTATTACGTCCGTGTGGTTGA

Protein sequence :
MSAFSADDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQRAGDPHAEVFALCAAGDRARGATAYVTLEPC
AHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNRGFLSRVERGRPWVRIKLGS
SLDGRTALASGESKWITGEAARADVQRWRARASAILTGAGTVLADDPALTVRLGGEEGAFLPPLRVVLDSSLRSLSCVKV
RDGTAPTLYLHGFGVTSPVLQHVDFSEVQQRDAGLDLEAVLRLLGERGINEVQVEAGATLCGALLHAGLVDELLIYIAPL
LLGDTARPLLAGLDIGRMDQCIGLKVLEVAQVGNDLRLLLRPCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-63 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-63 49