Gene Information

Name : XFLM_02810 (XFLM_02810)
Accession : YP_005999927.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 594616 - 596772 bp
Length : 2157 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
ATGCCGCGTGCACGTTCGCATGCCATCGACTTGAACGTAGCTGGCAATGCCCCATTGTCGGTGCTGCCGCGGGTTGGGCC
GGTATTAGCTGGAAAATGCGCTGCACGTGGCATCTTCACCTTGCAGGATTTGTGGCTACTGCTCCCATTACGTTATGAGG
ACCGTACCCGGCTAACCCCGATTGCCGAGCTTCAGGATGGGGTTGCGGTTCAGATTGAGGCCCGAGTGGAAGCGGTGGAG
CGTAGTTTCCGTTACCGGCCGCTATTACGCGTGGTGTTGTCCGACGACGCACATCACATACTGACGATGCGTTTTTTCCA
TTTTCGCGCCGCACAGATTGCACGGTTTACTGTCGGCACACGGGTGCGTGCGTATGGCGTACCCAAACTTGGCCAATATG
GTTGGGAGATTGTCCATCCCAGCTACCGCATTCTTGCCCCTGGTGAAGCTGTCAGCCTCAATGACTGCTTGGACCCTGTG
TATCCGGTGATTGATGGCGTGGGGCCTGCCATCGTGCGTCAGCTCATCCGCGAAGCGTTGGAACATTTACCTACGGATGC
AGCCTTAGAACTCTTGCCAGACGTTTGGTTGAGTGACCTTGGCCTGCCAACGCTGCGTACAGCCCTACTTATCATGCACC
GGCCCCCGCTGGATGCGGATATTGCCCGATTGATGGTGGGCACTCACCCCGCGCAGCAGCGCTTGTCGTTGGAAGAATTG
CTTTCCCACCAACTCAGCCTGCGTCGCCAGCGCATTGCATTGCAACGTCATTCCGCCCCCGCATTGCCTGATGGAGCGGC
TTTGGTGGCCTCTTTGTTGCACGCACTGCCGTTTCACCTCACTGCTGCGCAGCAACGGGTATTCGCCCAGATTGCTGCTG
ATGTGGCCAAGCCGGTCCCAATGCTGCGTCTTGTGCAGGGTGATGTTGGCAGCGGTAAGACCGTGGTTGCAGCATTGGCC
GCATTACTTGCTGTTGAGCAAAACAAGCAGGTGGCTCTGGCGGCACCGACAGCGTTACTGGCCGAGCAACACTTTATCAA
CCTGCGTGACTGGCTGGAGCCATTGGGCGTGCGTGTGTATTGGTTGGCTGCCAAGGTGACCGGCAAGGCCCGTCTCCAAG
CGCTGAATGATGTGGCCTCTGGTGATGCGCAGGTGGTCGTCGGTACACATGCCCTGATGCAAGAGTCTGTGGTGTTTCAT
GACTTGGCACTGACCATTGTCGATGAACAGCACCGTTTTGGCGTCCATCAGCGCTTGTTGCTTCGTGACAAAGGGGCTAC
TGATGGCATTGTGCCGCATCAGTTAGTGATGACCGCTACACCGATTCCACGCACCTTAGCGATGGCTGCGTATGCTGATT
TGGATGTTTCGGTGATTGACGAAATGCCGCCTGGCCGTACCCCGGTGCAAACGAATGTATTGAGTGCTGAGCGTCGCCCG
GAATTGGTGGAACGTATCCGTCTGGCTTGTGCTCAGGGGCGCCAGGTTTATTGGGTGTGTACGCTGATCGACGAAAGCCA
AACGGAAGCAGAACAGGCACCCCCCAGCAGTAACGATATTGGGCATCGCAGCGAGGTACAGGCGGCACAGGCCACCTATG
AAGCACTGTCTGCACAATTGCCTGGTGTCCGTGTCGGACTCGTGCATGGGCGCATGAAGGCAGCGGAAAAACAGCGGACA
ATGCGTGCGTTCAAATGCAACGAAATTGATGTCTTAGTTGCTACCACGGTGATTGAGGTGGGTGTCGATGTCCCCAATGC
GTCGCTCATGATTATCGAAAATGCTGAGCGTTTGGGTTTAGCGCAACTCCATCAGTTACGTGGTCGGGTCGGACGTGGTT
CTGTTGTGTCAAGTTGCGTTCTGTTGTATCAGCCCCCACTGTCGATGCTGGCGCGTCAGCGTCTGCAAATCATGCGCCAG
ACGAACGATGGTTTTGCGATTGCTGAAAAAGATCTGGAATTACGTGGTCCCGGCGAATTGTTGGGGACACGTCAAACAGG
TCTTGCAGCGTTTCGTGTTGCTGACCTTGCCCGCGATGCCCATCTGCTGCCCCGCGTGTATTCGTTGGCGAACATGTTGC
TTGACGAATCGCCACAGTTAGCTGATCAAGTGATTGCGCGCTGGATTGGTAGTGCGGTGCGTTATGCATCCGCCTGA

Protein sequence :
MPRARSHAIDLNVAGNAPLSVLPRVGPVLAGKCAARGIFTLQDLWLLLPLRYEDRTRLTPIAELQDGVAVQIEARVEAVE
RSFRYRPLLRVVLSDDAHHILTMRFFHFRAAQIARFTVGTRVRAYGVPKLGQYGWEIVHPSYRILAPGEAVSLNDCLDPV
YPVIDGVGPAIVRQLIREALEHLPTDAALELLPDVWLSDLGLPTLRTALLIMHRPPLDADIARLMVGTHPAQQRLSLEEL
LSHQLSLRRQRIALQRHSAPALPDGAALVASLLHALPFHLTAAQQRVFAQIAADVAKPVPMLRLVQGDVGSGKTVVAALA
ALLAVEQNKQVALAAPTALLAEQHFINLRDWLEPLGVRVYWLAAKVTGKARLQALNDVASGDAQVVVGTHALMQESVVFH
DLALTIVDEQHRFGVHQRLLLRDKGATDGIVPHQLVMTATPIPRTLAMAAYADLDVSVIDEMPPGRTPVQTNVLSAERRP
ELVERIRLACAQGRQVYWVCTLIDESQTEAEQAPPSSNDIGHRSEVQAAQATYEALSAQLPGVRVGLVHGRMKAAEKQRT
MRAFKCNEIDVLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGSVVSSCVLLYQPPLSMLARQRLQIMRQ
TNDGFAIAEKDLELRGPGELLGTRQTGLAAFRVADLARDAHLLPRVYSLANMLLDESPQLADQVIARWIGSAVRYASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-93 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XFLM_02810 YP_005999927.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-146 55