Gene Information

Name : XFLM_00130 (XFLM_00130)
Accession : YP_005999422.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 29964 - 32282 bp
Length : 2319 bp
Strand : +
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGCAAAACAGCCTCCTCACCCAGCATATTGCTCAGATCATTGCCACTGAGATCTCCTCACAGCCCACCCAAGCACGCGC
AGCCATCGCCTTGCTTGATGAAGGCGCAAGTGTCCCCTTCATCGCACGCTACCGTAAAGAAGCCACCGGCGGCCTGGATG
ACACCCAATTACGCACCCTCGAAACCCGATTAACCTACCTACGCGAACTGGAAGAACGCCGCTCAGCCATCCTCGCCAGC
ATCACCGAACAAGGCAAACTGAACGACCTCATACACGCCGAGATCCTCGCTGCCGACACCAAATCGCGTTTGGAGGACCT
CTATCTCCCATACAAACCCAAGCGCCGCACCCGCGCACAGATCGCACGCGAAGCAGGCTTAGAACCATTAGCCGATAGCC
TACTGACTGACCCCACACTGATTCCAGAGACCGTTGCCGCCAACTTTGTCGACCCTGAGAAAGGGATCACCGACATCAAA
ACCGCACTTGAAGGCGCACGTGCGATCCTGATAGAGCGCTGGGGAGAAGATGCCGCTCTGATCGGTGAACTACGTCAATG
GCTCACCAACAATGGAGTGATTCATGCACGCCTCATCGACAACAAAGAAGACACTGGAGCCAAATACAGAGACTACTTCA
ACCATACCGAAGTGCTCTCCAAAATTCCCTCACACCGCCTGCTCGCATTGTTCCGCGCGCGCTCTGAAGAAATACTGCAT
TTAGACCTAGATCCCGGTAATGATGCTGACGCTGGCCATCAATACTGTGAAAGCATGGTCATGCAAGCCGCATGTGTCGC
TGACCAAGGGCGCCCAGCGGATACATGGTTAATGACCGCCTGCCGCCTCACCTGGCGTGCCAAACTTCATATGCATTTGA
TGTTGGACCTCTTCAACCAAGCACGAGAAAAAGCCGAAGCAGAAGCAATCACTGTATTCAGCAATAACCTCAAAGATCTC
CTGCTAGCCGCACCGGCTGGACCACGCATCGTTCTGGGGATTGATCCAGGCATCCGCACCGGCTGCAAAATCGCTATCGT
CGACACCACCGGCAAACTGATCGCAACAGAAACAATCTACCCGCACGAGCCGCGGCGCGAGTGGGACAAATCACTACACA
CCCTAAAGACACTCTGCACCCAACATCACGTCACACTGATTGCCATTGGCAATGGCACCGCAAGCCGCGAGACCGACAAA
CTAGTAAGCGACCTGATCAAAGCGCATCCTGCATTGAAACTGCAAAAAATCGTTGTCAGCGAATCAGGAGCCTCCGTCTA
TTCTGCCTCCGAATCCGCCGCTAAAGAATTCCCCAACCTGGATGTCTCCTTACGCGGCGCCGTCTCAATTGCACGCCGCC
TCCAAGATCCGCTAGCTGAACTAGTTAAAATCGACCCCAAAGCAATCGGAGTTGGGCAATACCAACACGACGTCGACCAA
TTTCACCTCGCCAAAGCCCTGGATGCACGTGTAGAAGACTGCGTCAATGCCGTTGGAGTCTATGTCAACACAGCATCCGC
AGCATTGCTATCGCGCGTATCCGGCCTATCTGCGAGCGTCGCCGAAAACATCACTCGCTATCGCGACGAACACGGATCAT
TCAAACAACGCCAAGACCTGCTGAAAGTACCCAGACTCGGCGCAAAGACCTTTGAACAATGCGCCGGATTCCTTCGTATT
GCTGACGGCAACCAACCTCTGGACGCATCTGCAGTACATCCAGAAGCCTACCCAGTCGTCGAACGCATTGTGCAAACCAC
AGGCAAACCAATCAAAGCATTGATTGGCGATAGCCACACCTTACGCATGCTCAAACCAGAACAATTCACTGACACGAACT
TCGGAATACCAACCATCCGCGACATCATCAAAGAACTAGAAAAACCAGGCCGCGACCCACGTCCAGAATTCAAAGCTGTG
CGATTTACAGAAGGCGTAGAAAACATCAAAGACCTCAAACCAGGCATGATCCTTGAAGGAGTCGTTAGCAACGTCGCCGC
ATTTGGTGCCTTCGTCGATATTGGAGTACACCAAGACGGATTAATTCACATATCAGCCCTAGCGGACCGCTTCGTCAAAG
ACCCACGTGACATTGTCAAAGCGGGCGACATTGTCAAAGTCAAAGTTTTGGAGATTGATGTACCGCGCAAACGTATCGCA
CTGACCTGCCGCCTCCATGAAGAAACACCACCAGAAACCCCAGCAGCGAATAGAACTGGGAATGAACGCGGCAGACCCAA
CCCCGTTGCAAAAAAACTCAAAGCCACACCAACCGAAAACGCACTCGCACAAGCCTTCGCACGTGCACGACTCAAATGA

Protein sequence :
MQNSLLTQHIAQIIATEISSQPTQARAAIALLDEGASVPFIARYRKEATGGLDDTQLRTLETRLTYLRELEERRSAILAS
ITEQGKLNDLIHAEILAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADSLLTDPTLIPETVAANFVDPEKGITDIK
TALEGARAILIERWGEDAALIGELRQWLTNNGVIHARLIDNKEDTGAKYRDYFNHTEVLSKIPSHRLLALFRARSEEILH
LDLDPGNDADAGHQYCESMVMQAACVADQGRPADTWLMTACRLTWRAKLHMHLMLDLFNQAREKAEAEAITVFSNNLKDL
LLAAPAGPRIVLGIDPGIRTGCKIAIVDTTGKLIATETIYPHEPRREWDKSLHTLKTLCTQHHVTLIAIGNGTASRETDK
LVSDLIKAHPALKLQKIVVSESGASVYSASESAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVDQ
FHLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSASVAENITRYRDEHGSFKQRQDLLKVPRLGAKTFEQCAGFLRI
ADGNQPLDASAVHPEAYPVVERIVQTTGKPIKALIGDSHTLRMLKPEQFTDTNFGIPTIRDIIKELEKPGRDPRPEFKAV
RFTEGVENIKDLKPGMILEGVVSNVAAFGAFVDIGVHQDGLIHISALADRFVKDPRDIVKAGDIVKVKVLEIDVPRKRIA
LTCRLHEETPPETPAANRTGNERGRPNPVAKKLKATPTENALAQAFARARLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 58