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Name : XFLM_09255 (XFLM_09255) Accession : YP_006001107.1 Strain : Xylella fastidiosa GB514 Genome accession: NC_017562 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2019553 - 2021241 bp Length : 1689 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGAAGCATCCATCGTTGAGTCGTTGTTGCAGCGTCGTTGCTTGAAAGAAAGTGATCTGTATCGTGCGCGTCAGTTGCA GGCCGAATCCGGTGTTGGGTTGTTACCTTTGTTGGGCCGTCTTGGTTTGGTTTCTGAGCGCGATCACGCTGAAGTATGTG CGGAGGTGATGGGGCTGTTGTTGATACAGGTGCGTGAATTGCCGGATACGCCGCCAGAATTCTCGGCGGAGGTGCATGGG TTGTCCATTCGCTTTCTCAAACAGTTCCATGTATGCCCGCTTGCTGAGCATGATGGTGTGTTGCAGTTGTGTGTTGCAGA TCCATTTGATGTGTACGCCATTGAGGCGTTGCGCCTTGCCACAGGTGCAGTATTGCAATTGTGTATCGGTTTGCGTTCCG AAATTGATGACTTGGTCGAGCGCTGGTATGGCCAAGGCCGCAGCGTCATGGGCATGATCGTGGAGGCGACCGATGGTGAT GCGGCGCCCACAGATGACATTGAGGCTTTGCGTGATCTGGCGTCTGAAGCGCCTGTGATCCGGCTGGTGAACTTGGTGAT TCAGCGTGCGGTTGAATTACGCGCCTCTGATATCCATATCGAACCATTCGAGAATCGGTTGAAGGTACGTTATCGCGTCG ATGGCGTGTTGATTGATGCGGAGAGTCCGCCATCTAAATTGGCTGCTGCTGTGGTTTCACGTGTCAAGATTATGGCCAAA CTTAATATTGCTGAACGCCGCTTGCCCCAGGATGGGCGAATCATGTTGCGTGTTCAGGGTAAAGAGCTGGATCTGCGGGT GAGTGTTGTGCCGACTTCACATGGTGAAAGCGTCGTGATGCGCCTGCTTGACCGGGAGACGGTGGTATTCGATTTTCAGA AGCTTGGTTTTACCGATGAGTTATTAAACAGGTTCTCCCGTGTGTTGGAGATGCCTCATGGCATTTTACTGGTCACGGGT CCGACGGGATCTGGAAAGACCACCACGCTGTATACGGTGTTAAATCGTCTCAATACTACCGGTGTCAAGATTATTACGGT GGAAGATCCGGTTGAGTATCAGATTGAAGGCATCAATCAGATCCAGGCGAAGCCGCAGATCGGGCTGGATTTTGCCAGCG CACTACGCAGCATTGTGCGTCAGGATCCGGACATCATCATGATTGGTGAAATGCGGGATCTGGAAACTGCGCGCATTGCT ATCCAGTCGGCGCTGACAGGTCATTTGGTGCTGTCTACTTTGCATACCAATAGTGCTGCCGGTGGGCTGACCCGATTACT GGATATGGGTGTGGAGGATTATTTGTTGACCTCCACAATCAATGGTGTTTTGGCGCAGCGTTTGGTGCGTCGCTTGGAGC CTATGCATGCTGAGCGTTATCTTGCTTCGCCAGAGCAGATCGCGCGTTTTGATTTGCGCCGTTTACAGCCAGAGGGTGAT ATTTATTTGTACCGTCCGCGCGCTTCAGCGCTTGCGCCCACTGGGTATCTGGGCCGTACGGCGATCGTCGAATTTCTGAT TATGGATGATGCGCTGCGCCGCGCGGTGATCAGCCGTACCGGCATAGGGGAGTTGGAGCAGATCGCACGTCAAGCAGGGA TGCGTACTATGTACGAGGACGGTCTCATCAAGGCATTGGCTGGTGAGACCACGATTGAAGAGGTCTTGCGTGTGACGGAG GAAGGCTGA Protein sequence : MEASIVESLLQRRCLKESDLYRARQLQAESGVGLLPLLGRLGLVSERDHAEVCAEVMGLLLIQVRELPDTPPEFSAEVHG LSIRFLKQFHVCPLAEHDGVLQLCVADPFDVYAIEALRLATGAVLQLCIGLRSEIDDLVERWYGQGRSVMGMIVEATDGD AAPTDDIEALRDLASEAPVIRLVNLVIQRAVELRASDIHIEPFENRLKVRYRVDGVLIDAESPPSKLAAAVVSRVKIMAK LNIAERRLPQDGRIMLRVQGKELDLRVSVVPTSHGESVVMRLLDRETVVFDFQKLGFTDELLNRFSRVLEMPHGILLVTG PTGSGKTTTLYTVLNRLNTTGVKIITVEDPVEYQIEGINQIQAKPQIGLDFASALRSIVRQDPDIIMIGEMRDLETARIA IQSALTGHLVLSTLHTNSAAGGLTRLLDMGVEDYLLTSTINGVLAQRLVRRLEPMHAERYLASPEQIARFDLRRLQPEGD IYLYRPRASALAPTGYLGRTAIVEFLIMDDALRRAVISRTGIGELEQIARQAGMRTMYEDGLIKALAGETTIEEVLRVTE EG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-85 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-85 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XFLM_09255 | YP_006001107.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-86 | 50 |
| XFLM_09255 | YP_006001107.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-86 | 49 |
| XFLM_09255 | YP_006001107.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-84 | 47 |
| XFLM_09255 | YP_006001107.1 | general secretory pathway protein E | VFG1880 | Protein | 5e-77 | 44 |
| XFLM_09255 | YP_006001107.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-67 | 43 |
