Gene Information

Name : xerD (XFLM_08820)
Accession : YP_006001022.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1919602 - 1920576 bp
Length : 975 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGACCCTCCGCACCACCAACCAACGCCGCCAACTGGCCAGACAACAACCTCCCCTATTACCCGAAGATGCAACAACCAT
TGCACACTGCCTTGATGCACTCTGGATCAAACACGGACTATCACGGCACACCCTCAACAGCTACCGACGCGACCTGGAAG
GCCTGGCCCGCTGGAACAACGGCCGTGCCGGACCTCTAGCGACCTTAACGCCACCTGCCCTGCTCGATTACCTCACCTGG
CGCACCCAACAACACTATTCCCCACTGAGCAATGCACGCTTACGGTCCGTACTGCGTACCTTCTTTTCCTATGCCGTCGA
ATGCGGCTGGCGCAACGACAACCCAAGCACCCTGCTAGCCCACCCAGTCTTACCCCATCCATTACCGAAAGCACTCACCG
AAAGTCAGATAGAAGCACTCTTAGCCGCACCATCAATAGAAACCCCAGAAGGACTACGTAACCGAGCCATGCTGGAATTG
ATGTATGCCGCCGGCCTGCGCGTCAGTGAATTGGTCACCCTCCCCGTGGCGATGCTGAACCAACGTCAAGGCGTCCTACG
CATCACCGGCAAAGGAGGTAAAGAACGACTCGTCCCACTCGGCGAAGAATCCCAACACTGGCTACAACGCTATTTAGAAC
AGGCACGGCCATCCCTGGCGGCCGACAAACCCATTCCCGCCGACTCGGACGGAGACGTCCCCTTGTTCATCAACACAAAC
CTGAAACGTCTCAGCCGCCAACAATTTTGGAGATGGATCAAACACTATGCCGCCTTGGTCGGCATCGCCCCAAACAAAGT
CAGCCCCCATGTCCTGCGTCACAGCTTTGCAACACATTTACTGAACCACGGCGCAGACCTGCGTGCATTGCAAATGTTGC
TGGGCCATCGCTCCATCTCGACGACACAGATCTACACACTCATCGCACGCCAGCACTTACAACAATTGCACGCCCAACAC
CACCCCCGTGGTTGA

Protein sequence :
MTLRTTNQRRQLARQQPPLLPEDATTIAHCLDALWIKHGLSRHTLNSYRRDLEGLARWNNGRAGPLATLTPPALLDYLTW
RTQQHYSPLSNARLRSVLRTFFSYAVECGWRNDNPSTLLAHPVLPHPLPKALTESQIEALLAAPSIETPEGLRNRAMLEL
MYAAGLRVSELVTLPVAMLNQRQGVLRITGKGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTN
LKRLSRQQFWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQIYTLIARQHLQQLHAQH
HPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-41 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-41 52