Gene Information

Name : XFLM_08770 (XFLM_08770)
Accession : YP_006001012.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Virulence
Product : polysialic acid capsule expression protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1909141 - 1910142 bp
Length : 1002 bp
Strand : -
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence :
ATGGCTGTCTCATTACTCCAGCACAATCACCTCAGCGATACAGCGCTGATCGCAAGCGCAAGAAGGGTGATCGAGATTGA
GCGTGAGGCGCTGACATTACTCAACGAACGGATAGGCGCACCATTTGTGGCAGCCTGTCGGCTGATTCTGAACTCGCACG
GCCGCGTGATCAGCACTGGCATGGGCAAATCCGGACACATTGCACGCAAGATCGCTGCCACCTTGGCTTCAACGGGTACA
CCCGCATTTTTCGTACATCCCGGCGAAGCTGGGCATGGCGACCTTGGAATGATCACGGACAGCGATGTGATCCTGGCGTT
GTCCTACTCAGGTGAATCAGACGAAGTACGGATGCTGCTTCCAGTCCTCAAGCGTCAAGGCAATCCAATCATTGCCATGA
CCGGCCGCCCCCAATCAACACTGGCACAGGCTGCCGATGTGCATCTGGATGTCAGTGTCACCACCGAAGCCTGCCCACTG
GATCTAGCGCCAACCTCCAGCACAACCACTTCGCTAGTAATTGGCGACGCACTCGCAGTCGCACTATTGGATGCACGCGG
CTTTACTGCGGAAGATTTTGCCCGCTCACACCCCGCTGGCCACCTAGGTCGACGCCTACTACTGCACATTACGGACGTGA
TGCACAGTGGTGATGACCTGCCAGCAGTACATGAGGAAGCCACACTGAGCGAGGCATTACTCGAGATGACTCGCAAACGT
CTGGGCATGACTGCAATCGTTGACAACGAGGGCCGACTCCAGGGAGTGTTCACTGACGGCGACTTGCGCCGTGCTCTGGA
CAGCAACATTGATGTAAGAAACGCGCGCATCAACGAAGTCATGACCCGCCATCCCAAAACAATCAATGCCGACCAACTCG
CGGCCGAAGCTGCACGATTGATGGAAGCCAATAAAATCAATGGTTTGATTGTGGTCGATCCGCAACAGCGTGCGGTAGGC
GCCCTGAACATTCACGACCTGCTGCACGCCAAAATTGTTTAA

Protein sequence :
MAVSLLQHNHLSDTALIASARRVIEIEREALTLLNERIGAPFVAACRLILNSHGRVISTGMGKSGHIARKIAATLASTGT
PAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPL
DLAPTSSTTTSLVIGDALAVALLDARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKR
LGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKINGLIVVDPQQRAVG
ALNIHDLLHAKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-58 45
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 6e-59 45
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-58 45