|
Name : lysS (XFLM_07415) Accession : YP_006000763.1 Strain : Xylella fastidiosa GB514 Genome accession: NC_017562 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1614202 - 1615722 bp Length : 1521 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGAGCATCTCCCTGCGTCGCAGGTGTCCTTTGACGAGAACGCGCTGATTGCCGAGCGCCGTGCAAAACTTTTAGC ACTACGTGCGCAAGGCGTGGCTTATCCGAATGATGTCAAACGCGAGCATTATGCTGCTGATGTGCAGGCAGCATTTGCCA ACGTCGAGACATGGACTGCTGAGACCCTGGAGGCGTCAAGCCATCGTGTACGTATGGCTGGCCGATTGATGGCTAAGCGT CTCATGGGCAAGGCCAGCTTTGCTCAGATTCAGGACGAGTCTGGCCGCATCCAGCTGTTAATACAGAGTAACGTGCTTGG TGAGGACAGCTATGCCGCATTCAAGGTGTTGGATGTTGGCGACATCATTGCTGTTGAAGGAGGATTGACCCGCACCAGAA CGGGCGAGCTGTCGGTCAAGGTGAATGTTTTGCGACTTTTGACGAAGGCGTTACGTCCATTGCCTGACAAGTGGCACGGG CTGACTGATGTGGAGCAGCGCTACCGCCAGCGCTATGTTGATCTTATTGTGACTCCAGAATCGCGTGAGATCTTCATCAA ACGCTCCAAGATCATTCGTGCGCTGCGTACTTGGCTGGATGCGCGTCTTTTCTTGGAAGTAGAGACGCCGATGATGCATT ACATCCCAGGAGGTGCTGCGGCTAAGCCGTTTGTGACCTACCACAATGCCTTGGATTTAGAGTTATATCTGCGCGTGGCC CCAGAGTTGTATCTCAAGCGTTTGGTCGTGGGTGGGCTGGAACGGGTTTACGAGATTAACCGCAACTTCCGTAACGAGGG GGTGTCGACCCGGCACAACCCCGAATTTACGATGCTTGAGTTATACGAGGCCTATTCCACCTACCATGAGGTCATGGATC TGGCTGAGACGATGATCCGTGATACTGCACAGTCTGTGCTGGGCACGACCCAGGTGATTTGGGACGGTGCTCAGATTGAT CTGGGTCCGATATTCCGGCGTTGGCGCATGGATGAGGCAGTTTGCCATCATAATCCTGAGATGAGCGTTGCCGAGTGTAC CGATCGTGATGCATTGCTCCTTCACTGTGAGAGACTCAAGATCAAGGTTAAATCGTCCTACGGTTGGGGTCGATTGCTCT TGAGTATTTTTGAGGCGACTGTTGAGCATACGTTGATCCAGCCGACCTTCATTACGGATCATCCGGTTGAAATCTCTCCT TTAGCGCGCGAAAGCGACATCGAATCAGGGTATACCGATCGCTTCGAACTGTTCATCAATGGGAAGGAAATCGCCAACGG TTTCTCGGAATTGAACGATCCGGAGGAGCAGGCGATGCGCTTCCAAAAGCAGGTTGAAGCCAAAGAAGGGGGGGATGATG AGGCCATGTACTACGATGCCGACTATATTCGCGCTTTGGAGTATGGGATGGCGCCAACCGGAGGGTTAGGGATTGGTGTT GATCGACTGGTGATGCTGCTGACCGGTAGCACCTCAATCCGCGATGTGCTGTTATTCCCTTATATGCGTCCAGAACGTTA A Protein sequence : MTEHLPASQVSFDENALIAERRAKLLALRAQGVAYPNDVKREHYAADVQAAFANVETWTAETLEASSHRVRMAGRLMAKR LMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDVGDIIAVEGGLTRTRTGELSVKVNVLRLLTKALRPLPDKWHG LTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVA PELYLKRLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQID LGPIFRRWRMDEAVCHHNPEMSVAECTDRDALLLHCERLKIKVKSSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISP LARESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGV DRLVMLLTGSTSIRDVLLFPYMRPER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-127 | 54 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006000763.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-127 | 54 |
