Gene Information

Name : actP (XFLM_00560)
Accession : YP_005999502.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Resistance
Product : acetate permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120848 - 122572 bp
Length : 1725 bp
Strand : -
Note : COG4147 Predicted symporter

DNA sequence :
ATGAACATAGGCAGGCATCTTTTGTTGGTGTTGTTTGGGTGGTTGCCGGTGAGATTGGGGTTTGCTGCAGATGCGATAAG
TGTTGTCGATAAGCAGCCGGTAAATTGGGTGGCGATCACCATGTTCGCTGTTTTTGTGCTGATTACGTTATGGATCACTC
AGTGGGCCGCGAAGAAGACGCGATCATCTGCGGACTTTTATACGGCTGGGGGGACAGTCACCGGTTTCCAAAATGGTTTA
GCGATTGCCGGTGACTACGTGTCCGCTGCTTCGTTTCTTGGTATTACTTCGGCAGTGATGGCCAATGGCTATGATGGAAT
GCTCTATGCAATTGGCTTTTTAGTTGGTTGGCCGATTCTGACTTTTTTGATTGCTGAGCGGCTGCGCAATCTTGGCAAAT
ATACTTTTGCTGATGTGGTGGCTTACCGTTTTGCGGCGACGTCAGTTCGGTTGTTTGCTTCCGTTAGTACGTTGGTGGTG
GTGTTGTGTTATCTGATTGCACAGATGGTTGGGGCCGGTGCGCTGATTAGGTTGTTGTTTGGTTTAGATTATTGGGTTGC
AATGGTGCTGGTTGGCGGACTGATGATGGTGTACGTGTTGTTTGGTGGGATGGCTGCAACCACCTGGGTACAGATTATTA
AGGCGGTGCTGTTGCTGATTGGTGCGACTTTCATGGCAGTCATGATCATGCGCAGGTTCGGTTTTAATTTTGAGGGGTTG
TTTGCGAGTGCGGTGGAGGTCAAGACTCAAATTGCGATGGCGGGCGGTAAATCTGGGGAGGAGGCTAAAGCGTTAGGGCT
ATCGATCATGGCGCCGGGTAGTTTTATCAAGGATCCAATTTCGGCGATTTCATTAGGCATCGCATTGGTATTCGGTACTG
CGGGGTTACCACATATTTTAATGCGCTTCTTCACCGTGCCTGACGCCAGACAGGCGCGTCATTCGGTGTTGTGGGCGATT
ACCTGGATCGGTTATTGCTACATCTTGATGTTTATCATTGGATTCGGTGCGATTGTGCTTGTGTTAGCGAATCCGCAGTA
TGCCGATATCGCTTCTGGCACCATCCGCGGTGGTCAGGGTGCAGCCAATATGGCTGCGGTGCTTGTCGCCAAAGTAGTCG
GGGGTAATGTGTTCATGGGGTTTGTCTCTGCTGTGGCATTTGCGACGATTCTGGCGGTGGTAGCAGGGTTGGCGTTGTCT
GGTGCATCGGCGGTGTCACATGATGTGTATGCGATGGTGATTAAGCAGGGTAAGCCATCTTCGGATACTGAGTTGTTGGT
CTCGCGTGTGACCACGGCAGTATTAGGTGTGGTTGCGGTGTTGCTGGGGATCGTGTTTCAGAAGCAGAATGTTGCGTTCA
TGGTGTCATTAGCATTTGCGATTGCAGCGTCGGCTAATTTCCCTGTACTGGTTCTGTCGCTGTTTTGGAAGAATTGTACG
ACGAGGGGTGCGGTAATCGGTGGTTTTCTCGGTTTGATTTCTTCGTTGGTGTTGACGGTGTTATCACCTTCGGTGTGGGT
CGATACGTTGGGTCATTCGGTGGATTCGGTGCGATTCCCTTACACGTCGCCGGCATTGTTTTCCATGACCATAGGGTTTG
TCGGTATTTGGTTGTTTTCGGTGCTGGATCGTAGTGGCCGGGCGGCGAAGGAGCGCGTTGCGTTTAAGGCGCAGCAGGTA
CGTGCTGAAACTGGATTAGGTGCTTCCAAAATGTCACCCAATTGA

Protein sequence :
MNIGRHLLLVLFGWLPVRLGFAADAISVVDKQPVNWVAITMFAVFVLITLWITQWAAKKTRSSADFYTAGGTVTGFQNGL
AIAGDYVSAASFLGITSAVMANGYDGMLYAIGFLVGWPILTFLIAERLRNLGKYTFADVVAYRFAATSVRLFASVSTLVV
VLCYLIAQMVGAGALIRLLFGLDYWVAMVLVGGLMMVYVLFGGMAATTWVQIIKAVLLLIGATFMAVMIMRRFGFNFEGL
FASAVEVKTQIAMAGGKSGEEAKALGLSIMAPGSFIKDPISAISLGIALVFGTAGLPHILMRFFTVPDARQARHSVLWAI
TWIGYCYILMFIIGFGAIVLVLANPQYADIASGTIRGGQGAANMAAVLVAKVVGGNVFMGFVSAVAFATILAVVAGLALS
GASAVSHDVYAMVIKQGKPSSDTELLVSRVTTAVLGVVAVLLGIVFQKQNVAFMVSLAFAIAASANFPVLVLSLFWKNCT
TRGAVIGGFLGLISSLVLTVLSPSVWVDTLGHSVDSVRFPYTSPALFSMTIGFVGIWLFSVLDRSGRAAKERVAFKAQQV
RAETGLGASKMSPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 7e-99 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 7e-64 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
actP YP_005999502.1 acetate permease BAC0564 Protein 2e-125 60
actP YP_005999502.1 acetate permease BAC0570 Protein 2e-106 56