Gene Information

Name : trwk (XALp_3187)
Accession : YP_005994975.1
Strain :
Genome accession: NC_017557
Putative virulence/resistance : Virulence
Product : probable conjugal transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 15278 - 17827 bp
Length : 2550 bp
Strand : -
Note : -

DNA sequence :
ATGGGCGCTGATCTTGCTGGCAGCCGGGAACTGCAAGACGAAATTCCAACATCGCGCTACATGCCCTACACCCGCCACGT
CACTGATTCGATCATCTCTACACGCGAGGGCGATCTTATTACGGTGTTGAAGCTAGGTGGCCGCTCCAACACGGGTGCTG
ACTATGCGACACAAATGCGCTGGGTGCAGGACTTGAACACGCTGTTGCGCGGTCTGGCCAGTGAGGCGAGCGATCACTTG
GCGCTGTGGTCGCATGTAGTCCGTCGCCGGGTAACCGAATACCAGCAGGCGGACTACACCAATCCGTTCTGCGCGGAGTT
CGATCGAAAATACAGGAATTTGTTCACCGCCGACTCCCTCATGCTCAACGAGCTTTACCTGACTGTGGCGTGGCGGGCGA
ACCCGGAGAAAATGCTGTCTCTCCTGTCCAAGTTCGAGCGCGAACCGCGGGCGGTGAACCAAGATCGCATGACGCGGAAC
GTGCGCGCCGTGGAAAAGGTGCAAAAGGCTCTGCTGATTTCACTAAAGCGCTACGACGCGGAACTGCTGGGCGTGTACGA
GCGCACGGCCGCCGGCGAGGTCGTGACGAACGAACTGCGCGAAAGCTGGAAAAAGCAGGGCGGCGAGGAACCGACCTATA
CCTATTCCAGTTCCGCGGAGTTCTTGAGCTATTTGGTCAACGGCGAATGGCTGCTACAGCCCGTGACCCGCGGCCACCTG
GCCGACACGATTCCACAGAATCGCGTGCTGTTCCCGCGGTGGGGGGAAGTGGGCGAGATTCGCACGGCATCGCGCTCGCG
CTATTTCGGCATGGTGGAAATCTTCGACTATGAGGATCGCACCGAGCCGGGGCACCTCAACGTGTTCCTAGAAGCGCCTT
TCGAGGGTGTGCTATCCCAGTCATTTTCTGTCTTGTCCACGGCCGCGGCCATGGCCTTCATGAAGCGCCACAAAGGTCAG
TTGGAAGATTCCAACGATGCCTCGGAAACACAGGTCGCTGAGATTGCTTATGCGATGGATCGGCTGGTGGCAGGCGAGTA
TGTGATGGGCCAGCACCATGCAACGATACTGGTTTACGGCGATACGCCCAACGAAGCACGCGACGGCACGGAGCGGGCAG
CGTCGATGTTCCGCGACGTCGGCATTGTGCCCAAGGTCGTGACACTAGCAATCGAGGCCGCGTTTTGGGCGCAGTTGCCC
GCAAACTGGAAGTATCGGCCGCGCCCTGCGGCGATCACGTCGCTGAATTTTCTTTCGTTCTCGTCGCTGCACAACTTCCT
GATGGGCAAGCCTGCCGGCAACCCGTGGGGGCCAGCGGTGACGCTGTTCAAAACGAAAGGCGACACACCGCTTTACTTCA
ATTTTCACTACACCGATACAGATGTGGACGCCGAAGGCGTGCGTACCAGTGCGCACACCATCATCACGGGCGCCAGCGGC
GAGGGCAAGACAGCGTTGGTCGGTGCGCTCATGACACAGGCCGAGAAGTTCAATCCGACCGTGGTCGCGTTCGACAAAGA
TCGCGGCATGGAAATTCTGATCCGCGCAATGGGCGGGAAGTATTTCCCATTGGTGATCGGTGAACCGACCTGCTGGAACC
CGTTCCAGTTGGAACCAACGCCGCGCAACATGGAGTTCTTGCGTGCTTTCCTGATCCAGCTTTGCCGTGGTGCGCCAAAG
CCTGGCGAGCCTGGAAAATACAACCACGACGTGACACAGCACGACGAAGATCAAATCAGTCGTGCGATGCAAACTGTGAT
GATCGAGATTTCCGACAAGCGGCTGCGTAACATGACGCGCCTTCTAGAGAACCTGCCCGAGACGAACCGCTACAGCGAAG
ATGCGCAGGCCCATCCCAGTGTCAAATCTCGCTTGCTCAAATGGACGGTAGGACACGAAAACGGATGGGCGTTCGACAAC
CCGACCGACGATCTGGACTTGTCACGCTTCCGAATCTACGGCTTCGACTACACCGACTTCCTAGACCATCCCGAGATTCG
CACGCCTGTGATGATGTACCTCATGCACCGCACCGAAGGCATGAAGGATGGCCGTCGCTTCATGCGGTTTTTCGACGAGT
TCTGGAAGCCGGTCCAAGATGAGATGTTCTCTAAGTGGGCGAAGGATGGCCTGAAGACCGACCGCAAGAAAAACGCCTTC
AACGTGTTCGTAACTCAGGAACCCAGCGATGCACTAGAAAGCACGATTGCCAAGACGATCATCCAGCAATGCGCGACGCA
GGTTTTCTTGCCGAACGTGAAGGCCACACGTGAGGAATATACGGAGGGCTTCAAGCTAACTAATGCTGAGTTCGACCTCG
TGCAGAGCATGCCGGAAGGCTCGCGACAATTCGTGGTCAAGCAGGGTGCGAACTGCGCGAAGGCACGGTTCCTTCTCGGC
CCTGAGTTCGTGCCTGAATTGGCCGTGCTGTCCGGTTCGCCCGATCGCTCGGAATTGTTGCAAGAGATCATCGCAGACGT
GGGCGATGATCCTAAAGACTGGCTTCCAGTCTTTGTTCGCCGCGTCACCCAACCGGAGAAGCAAAAATGA

Protein sequence :
MGADLAGSRELQDEIPTSRYMPYTRHVTDSIISTREGDLITVLKLGGRSNTGADYATQMRWVQDLNTLLRGLASEASDHL
ALWSHVVRRRVTEYQQADYTNPFCAEFDRKYRNLFTADSLMLNELYLTVAWRANPEKMLSLLSKFEREPRAVNQDRMTRN
VRAVEKVQKALLISLKRYDAELLGVYERTAAGEVVTNELRESWKKQGGEEPTYTYSSSAEFLSYLVNGEWLLQPVTRGHL
ADTIPQNRVLFPRWGEVGEIRTASRSRYFGMVEIFDYEDRTEPGHLNVFLEAPFEGVLSQSFSVLSTAAAMAFMKRHKGQ
LEDSNDASETQVAEIAYAMDRLVAGEYVMGQHHATILVYGDTPNEARDGTERAASMFRDVGIVPKVVTLAIEAAFWAQLP
ANWKYRPRPAAITSLNFLSFSSLHNFLMGKPAGNPWGPAVTLFKTKGDTPLYFNFHYTDTDVDAEGVRTSAHTIITGASG
EGKTALVGALMTQAEKFNPTVVAFDKDRGMEILIRAMGGKYFPLVIGEPTCWNPFQLEPTPRNMEFLRAFLIQLCRGAPK
PGEPGKYNHDVTQHDEDQISRAMQTVMIEISDKRLRNMTRLLENLPETNRYSEDAQAHPSVKSRLLKWTVGHENGWAFDN
PTDDLDLSRFRIYGFDYTDFLDHPEIRTPVMMYLMHRTEGMKDGRRFMRFFDEFWKPVQDEMFSKWAKDGLKTDRKKNAF
NVFVTQEPSDALESTIAKTIIQQCATQVFLPNVKATREEYTEGFKLTNAEFDLVQSMPEGSRQFVVKQGANCAKARFLLG
PEFVPELAVLSGSPDRSELLQEIIADVGDDPKDWLPVFVRRVTQPEKQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 0.0 49
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trwk YP_005994975.1 probable conjugal transfer protein VFG2259 Protein 0.0 49