Gene Information

Name : PAGR_g0080 (PAGR_g0080)
Accession : YP_005990841.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 87999 - 88670 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTTTACTGATTGAAGACGACCGCCTGATTGGAGACGGCATTAAAGCGGGACTCAGTAAGCTGGGATTCAGCGT
TGACTGGTTTGTCTCTGGCGAGGCCGGTTTTCAGGCATTAACGGCGGCGCCGTGGGATGCGGTCGTACTCGATTTATCAC
TGCCTGAGCGTGACGGGCTGGACATATTGCGTCAATGGCGTCAGCAGGGGCACGACGTCCCGGTTCTTATCCTTACCGCC
CGCGATGCGCTTGATCAACGCGTTGAAGGATTACAGATGGGGGCTGACGATTACCTGTGCAAACCCTTTGCCCTTACAGA
AGTTGCCGCACGCTTACAGGCACTGATTCGCCGCCGTCACGGGCAACTCCAGCCCGAACTGCGTCATGGCGATGTAGTGT
TGATTCCCGGTAATCTCAGCGTGGAAAGAAACGGCGAAAATATCGCGTTAAAAAGCCGTGAGCTGGCCCTGCTTGAGCTG
TTTATGCGAAATCCGGATCGGGTACTGACGCGAAGCCAGCTCGAAGAAAAGCTCTATACCTGGGATACCGAAGTGTCGAG
CAATGCGGTAGAAGTGCATATCCATCATCTGCGTAAAAAACTCGGTAACCGCTTTATCCGCACCATCCACGGCGTGGGCT
ATACGCTGGGGGAAAGCGAATGCGATCGATGA

Protein sequence : 
MRILLIEDDRLIGDGIKAGLSKLGFSVDWFVSGEAGFQALTAAPWDAVVLDLSLPERDGLDILRQWRQQGHDVPVLILTA
RDALDQRVEGLQMGADDYLCKPFALTEVAARLQALIRRRHGQLQPELRHGDVVLIPGNLSVERNGENIALKSRELALLEL
FMRNPDRVLTRSQLEEKLYTWDTEVSSNAVEVHIHHLRKKLGNRFIRTIHGVGYTLGESECDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-37 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g0080 YP_005990841.1 transcriptional regulatory protein QseB BAC0487 Protein 4e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g0080 YP_005990841.1 transcriptional regulatory protein QseB VFG0473 Protein 4e-39 43
PAGR_g0080 YP_005990841.1 transcriptional regulatory protein QseB VFG1390 Protein 2e-35 43