|
Name : PAGR_g0478 (PAGR_g0478) Accession : YP_005991237.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase GabD Function : - COG functional category : - COG ID : - EC number : - Position : 515479 - 516933 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGCATTCTTCACTGCACGACAGCGAACTGTTCCAGACAGGCTATCTGGTAAACGGGCAATGGCTGCGTACCACGTCTAC CTTTGACGTGACGAACCCTGCCACGGGCGAGGTCGTCGCTCAGGTGGCAAAAGCAGGAAAAACGGAAACGGAAGCTGCAA TAAAGGCTGCCCAGGATGCTTTCCCAGCGTGGCGAGCACAGACCGCCAAGGGGCGTTCAGAACTGCTGTACCGCTGGTAT AGGTTAATCATTGAACATAAACGCTGGCTGGCTGAGTTAATGACAACGGAGCAAGGCAAGCCGCTCAAGGAAGCAGAAGG CGAAGTGGAATATGCCGCCAGCTTTATTCAATGGTTCGCCGAGCAGGCTAAACGGGCTAACGGTGAAATCATCCCTCCTG CTAAAGCGGGCTCGCGCATTCTGGCAACCCGTGAGCCGGTCGGCGTCGTCGCCGCTATCACGCCCTGGAATTTCCCTATG GCGATGCTGACACGTAAGTTAGGCCCGGCGCTGGCAGCGGGATGTACAGGCATTATTAAACCCGCGAATAACACACCGCT TTCCGCATTTGCCTTACTGGCGCTGGCAAAAAAAGCCGGCATCCCCGATGGCGTGCTTAACGGTGTAGCAGGCGACACGC ATGCCATTAGCGATGCCATTATGGCCAGCAAAGCCGTACGTAAAATTTCCTTTACCGGTTCGACGGCAGTGGGGAAAACG CTAATGCGTAACGCTGCTGAAACCATGAAAAAGGTTTCGATGGAACTGGGCGGTAATGCGCCCTATATCGTCTTTGAAGA TGCAGATATCGATGCAGCCGTGCAGGGAGCCATCGCCAATAAATTCCGCAATGCCGGTCAGGTTTGTGTCAGCGTTAACC GCTTTTTCATTCACAGTGCAGTTTACGAACGTTTTACGACCCAACTGGCCGCTGAAGTGGATAAGCTTAGCGTCGGAAAC GGCATGGATAATGGCGTGGTCGTCGGCCCGTTAATCGAATCATCCGCATTAGAAAAAGTCGAAGAGCATGTCAAAGATGC CATTGCTCAGGGCGGAAAAGTGCTGACGGGTGGTCAGCGGCACGCGCTGGGCGGTAATTTTTGGCAGCCAACGGTCATTG TTGAGGCACATGAAGGCATGAAACTGGCTCAGGAAGAAACGTTTGGCCCGGTGGCAGCCTGTTTCCGCTTTGATGACGAA GAAGAGGTTATCCGTCGTGCCAACCAGACGGAATACGGGCTGGCGGCGTATTTTTATACGCAAAACCTGCAGCGGGTATT CCGGGTCTCTGCCGCGCTCGAAAGTGGAATGATTGGCATCAATGAGTGTGCGGTCTCGACAGAGTTGGCCCCCTTTGGCG GCGTGAAAGAGTCTGGTCTGGGACGTGAAGGATCGGTACTGGGGATGGATGAGTACCTGGAGGTCAAAGCGCTGCACCTC GGCGGGTTAAGTTAG Protein sequence : MHSSLHDSELFQTGYLVNGQWLRTTSTFDVTNPATGEVVAQVAKAGKTETEAAIKAAQDAFPAWRAQTAKGRSELLYRWY RLIIEHKRWLAELMTTEQGKPLKEAEGEVEYAASFIQWFAEQAKRANGEIIPPAKAGSRILATREPVGVVAAITPWNFPM AMLTRKLGPALAAGCTGIIKPANNTPLSAFALLALAKKAGIPDGVLNGVAGDTHAISDAIMASKAVRKISFTGSTAVGKT LMRNAAETMKKVSMELGGNAPYIVFEDADIDAAVQGAIANKFRNAGQVCVSVNRFFIHSAVYERFTTQLAAEVDKLSVGN GMDNGVVVGPLIESSALEKVEEHVKDAIAQGGKVLTGGQRHALGGNFWQPTVIVEAHEGMKLAQEETFGPVAACFRFDDE EEVIRRANQTEYGLAAYFYTQNLQRVFRVSAALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGMDEYLEVKALHL GGLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-132 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-79 | 41 |
