Gene Information

Name : PAGR_g3926 (PAGR_g3926)
Accession : YP_005994631.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein IucB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4263574 - 4264521 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTCAGGCAACGATTGTTCACAGCGGCCACGGCCTGCGTTGCGAAAAGTCAGGAAAAACCCTGAATCTGGGTTGGGG
ACAGGACAACAGTGCGGTGCTGCATTTTGCCGGTCCACTGCCCGAAGGCTGGCTGCGTGACGCGCTGGATCAGATGTTTA
TCGCTGCCCCGCAGCTTTCTGCCGTGGTGCTGCCCTTCGCAGAGTGGCGTGAAGAGCCTCAGGCGCTGGCGCTGTTTGCG
GCCCTGAAAAGCGATATCGTCCACCGCGAGACGTTCTGGCAACTGCCGCTGTGGTTGTCTGCGCCTCGTCAGCAGGCCTC
CGGCGAGATGGTATTTGATGCCGAACGTGAGATCTATTTTCCCCAGCGCCCAGCGCGACCTGATGGCGAAGTGTATCGCC
GTTACGATCCGCGCGTACGGCGAACGCTGAGCTTCCGCGTGGCCGATCCTGCCCGGGATGCCGAAGCGTTTACCCGCTGG
ATGAACGATCCGCGCGTGGATTACTTCTGGGAGCAGAGCGGATCGCTGGCCACTCAGACCGCCTATCTTGAACGCCAGCT
CGGCAGCAGCTATGCCTTTCCGCTGATTGGCTGTTTTGATGACGAGCCCTTCAGCTACTTTGAAATTTACTGGGCGGCGG
AAGATCGTATCGGGCGGCACTACAGCTGGCAGCCGTACGATCGCGGTTTGCATCTGCTGGTGGGTGAGCCGCAGTGGCGC
GGGCCGCACTTTGTGCAGAGCTGGCTGCGCGGCATCAGCCACTATCTGCTGCTGGATAATCCGCAAACCCAGCGCCTGGT
GCTGGAACCGCGGGCGGATAATCAGCGCCTGTTTCGTCACCTTGAACCCGCGGGCTATACCACCGTGAAAGAGTTCGACT
TTCCGCACAAGCGCTCTCGCCTGGTGATGACCCAGCGCGCCCGTTTCTTCAGCGAGGTGGGCCTGTGA

Protein sequence : 
MSQATIVHSGHGLRCEKSGKTLNLGWGQDNSAVLHFAGPLPEGWLRDALDQMFIAAPQLSAVVLPFAEWREEPQALALFA
ALKSDIVHRETFWQLPLWLSAPRQQASGEMVFDAEREIYFPQRPARPDGEVYRRYDPRVRRTLSFRVADPARDAEAFTRW
MNDPRVDYFWEQSGSLATQTAYLERQLGSSYAFPLIGCFDDEPFSYFEIYWAAEDRIGRHYSWQPYDRGLHLLVGEPQWR
GPHFVQSWLRGISHYLLLDNPQTQRLVLEPRADNQRLFRHLEPAGYTTVKEFDFPHKRSRLVMTQRARFFSEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 4e-125 81
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 4e-125 81
iucB AAK71632.1 IucB Virulence SHI-3 Protein 3e-125 81
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 2e-124 80
iucB AAD44747.1 IucB Virulence SHI-2 Protein 3e-125 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3926 YP_005994631.1 aerobactin siderophore biosynthesis protein IucB VFG0616 Protein 2e-125 81
PAGR_g3926 YP_005994631.1 aerobactin siderophore biosynthesis protein IucB VFG1082 Protein 2e-125 81
PAGR_g3926 YP_005994631.1 aerobactin siderophore biosynthesis protein IucB VFG0939 Protein 1e-124 80