Gene Information

Name : PAGR_g3925 (PAGR_g3925)
Accession : YP_005994630.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein IucC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4261841 - 4263574 bp
Length : 1734 bp
Strand : -
Note : -

DNA sequence :
ATGAATTCGCACGCATGGGAAACCGTTAACCGTCAGCTGGTGGCAAAAATGCTGGCCGAGCTGGAGTACGAGCAGGTCTT
TCAGGCTCAGCCGCAGGGCGACAACCGTTACTGCATCAGTCTGCCGGGTGCCGAATGGCAGTTCACCGCCGAGCGGGGCA
TCTGGGGCTGGTTATGGATTGATGCACAAAGCCTGCGCTGTGCGGATGAGCCGGTACTGGCCCAGACGCTGCTGTGCCAG
CTACAGCCGGTGCTGTCGATGAGCGATGCCACGGTGGCGGAACATATGCAGGATCTCTATGCCACGCTGCGCGGCGATCT
TCAGCTTATGCAGGCACGTCAGGGCATGAGTGCCGATGCGCTGATTGATATGGATGCCGACCGCCTGCAGTGCCTGCTCA
GCGGCCATCCCAAGTTTGCCTTTAATAAAGGCCGTCGCGGATGGGGACAAGAGGCGCTGGCGCGCTACGCACCCGAATAT
ATGAATACCTTCCGCCTGCACTGGCTGGCGGTAAAGCGTGAGCATATGGTCTGGCGCTGCGACAGCGAGCTGGACATCCA
GCAGTTGTTGCAGGCCGCGATGGACAGCGCCGAATATACGCGTTTCACCGAGGCCTGGCAGGCGCAGGGGCTGGACGACA
GCTGGCTGCCTTTGCCGGTGCATCCCTGGCAGTGGCAGCAAAAAATCGCGCTCGATTTTGTCGCGGATCTGGCCACGGGC
AATATGCTGTCGCTGGGTGAATTTGGCGATCGCTGGCTGGCGCAACAGTCACTGCGCACCTTGACCAACGCCAGCCGTCA
GGGCGGGCTGGATATCAAACTGCCGCTTACCATTTACAACACCTCCTGCTATCGCGGTATTCCGGGCAAATATATCGCGG
CGGGCCCGCTGGCCTCCCGCTGGCTACAAAACGTCTTTGCCACCGACACGACGCTGCAGCAGAGCGGGGCGGTGATCCTG
GGCGAGCCGGCCGCCGGTTATGTTTCCCATCGCGGCTACGGCGCGTTGCCCGAAGCCCCCTATCGCTACCAGGAAATGCT
GGGCGTGATCTGGCGTGAAAATCCGTCGCGCTGGCTGCACGCGGACGAAACGCCAATTCTGATGGCCACGCTGATGGAGT
GCGATGAAAACAACCAGCCGCTTATCGGCGCCTACATTGCCCGCTCGGGCCTGAGCGCCGAGGCCTGGTTAAGTCAGATG
TTCCGCGTGGCCGTGGTGCCGCTGTATCACCTGCTGTGCCGTTATGGCGTGGCGCTGATCGCACACGGGCAAAATATTAC
GCTGGCGATGAAAGACGGCGTACCCCAGCGCGTATTGCTGAAAGATTTTCAGGGCGATATGCGTCTGGTAAAGGACGATT
TTCCGGAGATGGACTCTCTGCCTCAGGACGTCCGCGATGTGACGGCACGCCTGAGTGCTGACTATTTGATTCATGATTTG
CAGACTGGCCATTTTGTCACGGTCCTGCGTTTTATTTCGCCGTTAATGGCGCGCCTTGGCGTTCCGGAACGACGTTTTTA
CCAACTGCTTGCCGCAGTGTTGAGCGACTATATGCAGGACCATCCGCAACTGTCGGCGCGTTTTGCGCTTTTCTCACTCT
TCAAGCCACAAATCATTCGTGTCGTGCTGAACCCGGTAAAACTCACCTGGCCCGATCAGGACGGCGGAAGCCGTATGTTG
CCCAATTACCTGGAAAATCTGCAAAACCCGCTGTGGCTGGTTACCAAGGACTGA

Protein sequence :
MNSHAWETVNRQLVAKMLAELEYEQVFQAQPQGDNRYCISLPGAEWQFTAERGIWGWLWIDAQSLRCADEPVLAQTLLCQ
LQPVLSMSDATVAEHMQDLYATLRGDLQLMQARQGMSADALIDMDADRLQCLLSGHPKFAFNKGRRGWGQEALARYAPEY
MNTFRLHWLAVKREHMVWRCDSELDIQQLLQAAMDSAEYTRFTEAWQAQGLDDSWLPLPVHPWQWQQKIALDFVADLATG
NMLSLGEFGDRWLAQQSLRTLTNASRQGGLDIKLPLTIYNTSCYRGIPGKYIAAGPLASRWLQNVFATDTTLQQSGAVIL
GEPAAGYVSHRGYGALPEAPYRYQEMLGVIWRENPSRWLHADETPILMATLMECDENNQPLIGAYIARSGLSAEAWLSQM
FRVAVVPLYHLLCRYGVALIAHGQNITLAMKDGVPQRVLLKDFQGDMRLVKDDFPEMDSLPQDVRDVTARLSADYLIHDL
QTGHFVTVLRFISPLMARLGVPERRFYQLLAAVLSDYMQDHPQLSARFALFSLFKPQIIRVVLNPVKLTWPDQDGGSRML
PNYLENLQNPLWLVTKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 85
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 85
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 85
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 84
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3925 YP_005994630.1 aerobactin siderophore biosynthesis protein IucC VFG0938 Protein 0.0 85
PAGR_g3925 YP_005994630.1 aerobactin siderophore biosynthesis protein IucC VFG0617 Protein 0.0 85
PAGR_g3925 YP_005994630.1 aerobactin siderophore biosynthesis protein IucC VFG1083 Protein 0.0 84