Gene Information

Name : PAGR_g3888 (PAGR_g3888)
Accession : YP_005994596.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : chromosome partitioning protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4221174 - 4222061 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGCATTCAAAAACTAAAGTCATACCCGTTGTTTCTACCAAAGGTGGAGAGGGTAAATCAACTCAAACCGCTAATCTTGG
TGGATTTCTGGCTGATGCCGGCCTGAAGGTTCTCATCATTGATGGCGATCACGCCCAGCCAACGGCCAGCAGTATATTTC
CTCTGACTTATGAAGCCCCCTGCGGATTGTATGAACTGCTTATGCAGAATGCAGACCTGTCAGTGGCTGATAACATCATC
TCCCGCACCTCCATCGATAACCTTCATCTCATTGCATCGAACGATCCCCGTAATCTTCTCCCGACCCACATGCTTAATGT
GCCCGATGGTCGTGTACGTCTGCGCAATGCGCTCTCAGCTCCTTTGTTTAAAAGCTATGACGTGATCCTGATTGATTCAC
AGGGTGCCAAATCCGTAATGCTGGAGCTGATTATACTGGCTTCGACGGGTGAAATGATTGGCATGGTCAAGCCTGTGCTG
CCAGATGTTAGGGAGTTTTTACGCGGAACGGTCGCGCTGATGGAGGACCTGCGTTCCTACTCTGCATTCGGGATCAGACT
GCCGGCTGTGCGCATGCTAGTTAACTGCATGAAATATACAGCTCTTGCAAAAACAACCTTTGAGCAGGCCGAAGCCATCA
TTAACAGCAGAGAGTACAGCGCTCATGCTGATGAAATAGCTATATCCATGCTGCAGACGCGTATTTACGATCTCACCGTC
TATGAGCAGGGCCATGCCAGCGGACTCCCTGTTCACCGGCTTGAGAGCAAAACGTCCCGCGTCAGCGATTCAGCATTTGA
CTCTATGCACAAGCTTGCGAGTGAACTGTTCCCCGAGTTCAAAGAGCGTTTTGACTCCTTTGCTGTCAGCGGAGGGTGTC
ATGTCTGA

Protein sequence :
MHSKTKVIPVVSTKGGEGKSTQTANLGGFLADAGLKVLIIDGDHAQPTASSIFPLTYEAPCGLYELLMQNADLSVADNII
SRTSIDNLHLIASNDPRNLLPTHMLNVPDGRVRLRNALSAPLFKSYDVILIDSQGAKSVMLELIILASTGEMIGMVKPVL
PDVREFLRGTVALMEDLRSYSAFGIRLPAVRMLVNCMKYTALAKTTFEQAEAIINSREYSAHADEIAISMLQTRIYDLTV
YEQGHASGLPVHRLESKTSRVSDSAFDSMHKLASELFPEFKERFDSFAVSGGCHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api1 CAF28475.1 putative ATPase Not tested YAPI Protein 7e-93 65
YpsIP31758_3748 YP_001402702.1 hypothetical protein Not tested YAPI Protein 1e-92 64
YE3515 YP_001007677.1 hypothetical protein Not tested YAPI Protein 2e-92 64
STY4521 NP_458616.1 hypothetical protein Not tested SPI-7 Protein 2e-80 59
t4226 NP_807828.1 hypothetical protein Not tested SPI-7 Protein 2e-80 59
PMI2642 YP_002152344.1 chromosome partitioning-like protein Not tested Not named Protein 1e-74 57
unnamed ABR13462.1 Soj Not tested PAGI-5 Protein 1e-45 43
soj AAP84239.1 chromosome partitioning protein Not tested PAPI-1 Protein 1e-47 42
soj AAN62201.1 putative chromosome partitioning related protein Not tested PAGI-2(C) Protein 4e-38 41