Gene Information

Name : PAGR_g3887 (PAGR_g3887)
Accession : YP_005994595.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : putative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4219817 - 4221181 bp
Length : 1365 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGATAACCGCCGAAATATTCCGGGCCTCTATGCACTGGACGCGGAACAGAGCGTCATTGGCGGCCTGATGCTGGA
CAATGACTGCTGGGATGAGGTTGTCATGCGTCTTGGGCCTGATGATTTCTTTCATAAGGCTCACCGGGAAATATTCAATG
CCATGTCGCATCTTGTGGCGGCAGGCAGGCCGATTGACCTGCTAACGCTTACCGAGAGCATTGAAAGCCGGGGCAAGAAC
CTGCTTGAGCAACTTGGCGGTTTTGCCTATCTGGCTGAGCTCGCCAAAAACACCCCCAGCGTGGCTAACATCACGCACTA
CTGCGACATCGTGGCCCGCTACAGTCGCGGGCGCCAGCTGGCAGCCATCGGTAGTGAGATACATGCGTCAGCCACCGCGC
CGGGCGCTGACATCGCGGCCGCGATGGAAACGGCCGAGCGGAAAATCACGCAGCTTGCAGAGCGGGCCGAACCACAGCAG
GGCGTGACCATAGTTGACGGACTGGAAAAGCTGGCGGCCGAACTTGAACGACGCTGTCAGACTCCTGACGGCATCACGGG
CACACCAACAGGGTTTGACGACCTGGATGCTTTCACAAGCGGACTTCAGCCGGGTGACCTTGTTCTCGTCGCGGCACGCC
CCTCCATGGGAAAAACTGCACTCCTAATTAATATCATCATGAATTCTCTGATGAAAAACGTGGCCTCAAACAGCCAGTTT
TACAGCCTGGAGCAGCCTGAAGAGCAAATTCTGATGCGCGTGGTTTCGTCGCTTGGCAATGTTGACCTGACCCGTATGAA
AAGCGGAATGATGGACGAAGAGGACTGGGCCCGCGTATCGAATGTTTTTAAGTTACTCACAGAGGATATTAAAGAGCGTC
TGCTCATTGATGACACCAGTGATCTGACGCCAGCCATGCTTCGCGTTCGTGCGCGACGTAATGCCCGCCGCTACGGTAAA
CCTGACATCATTGGTCTCGACTACCTTCAGCTCATGCGCTGTCCGGATCAGGAAAACCGCACCCAGGAAATCGCAGAGAT
ATCTCGTTCGCTGAAGGCGCTGGCCAAAGAGATGGGCTGTCCTGTGGTGGCACTATCACAGCTCAATCGTGCACTGGAAA
GCCGGGCCGATAAAAGGCCCAACAATGGCGACCTGCGTGACTCAGGTGCGCTTGAGCAGGATGCTGACGTCATCATTTTT
GTTTACCGTGACGAGGTTTACAAAGAAAACTCCCCTGACAAAGGCCTGGCTGAGCTCATTATCGGCAAACAACGTCAGGG
ACCAACCGGCACCCTGCGGCTGCGTTTTGAAGGCCGCTATACCCGATTTGAAAATCTTCAGAGCGATGTCGGGAGGTATG
CATGA

Protein sequence :
MSDNRRNIPGLYALDAEQSVIGGLMLDNDCWDEVVMRLGPDDFFHKAHREIFNAMSHLVAAGRPIDLLTLTESIESRGKN
LLEQLGGFAYLAELAKNTPSVANITHYCDIVARYSRGRQLAAIGSEIHASATAPGADIAAAMETAERKITQLAERAEPQQ
GVTIVDGLEKLAAELERRCQTPDGITGTPTGFDDLDAFTSGLQPGDLVLVAARPSMGKTALLINIIMNSLMKNVASNSQF
YSLEQPEEQILMRVVSSLGNVDLTRMKSGMMDEEDWARVSNVFKLLTEDIKERLLIDDTSDLTPAMLRVRARRNARRYGK
PDIIGLDYLQLMRCPDQENRTQEIAEISRSLKALAKEMGCPVVALSQLNRALESRADKRPNNGDLRDSGALEQDADVIIF
VYRDEVYKENSPDKGLAELIIGKQRQGPTGTLRLRFEGRYTRFENLQSDVGRYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-133 62
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-133 62
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-132 61
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-105 57
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-99 52
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-99 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-94 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-90 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-82 47