Gene Information

Name : PAGR_g3877 (PAGR_g3877)
Accession : YP_005994585.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4210003 - 4210557 bp
Length : 555 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGCACGCGGCGTCAACAAAGTTATCCTGGTCGGCAATCTCGGTCAGGACCCCGAAGTTCGTTATATGCCTGGCGG
TAAAGCAGTGACCGGCCTTTCGCTGGCCACTTCCGAAACCTGGCGTGACAAACAGACCGGTGAAAACCGGGAAATAACCG
AATGGCATCGCGTCGTGCTGTTTGGAAAGCTGGCTGAAGTAGCCGGTGAATACCTGCGTAAGGGTTCACAGGTTTACATT
GAAGGTCAGTTGAAAACCCGCAAATGGGAAGATAACGCAGGCATTACGCGTTATACGACCGAAGTAATTGTGGGCATAAA
CGGAACGATGCAGATGCTGGGCGGGGCTAAAAGCAGCACCAACACCAGTGGAAACAATAAGCCGTCAGGCCAGCAAGATG
GATGGGGTAAGCCACAACAGCCTCAGCCTTCTCAGGCACAACAGTCGGCTCCGAGTAATCCGGCGAACGAGCCGCCAATG
GACTTTGACGATGACATACCGTTCCTCGGACACGGGTATGGCGTCTGTCGTAAGACCATTTACGCAATTTCGTAA

Protein sequence : 
MSARGVNKVILVGNLGQDPEVRYMPGGKAVTGLSLATSETWRDKQTGENREITEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLKTRKWEDNAGITRYTTEVIVGINGTMQMLGGAKSSTNTSGNNKPSGQQDGWGKPQQPQPSQAQQSAPSNPANEPPM
DFDDDIPFLGHGYGVCRKTIYAIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-47 61
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-47 61
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-47 61
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 8e-34 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3877 YP_005994585.1 single-stranded DNA-binding protein VFG0576 Protein 2e-41 62