Gene Information

Name : PAGR_g3874 (PAGR_g3874)
Accession : YP_005994582.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : type IV pilus operon exported poprotein PilM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4207280 - 4207723 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence :
ATGGGTTTTGCCCTGCCGATAATCGCGCTGGCCATGTTCTTCGGGCTGATGGCCAGTGACGCCCAGCGCCGTAATTCTGA
CATTGTCACGCAGTCAGTGACCGTGGCCGCGCCCTCGCGGCTTGCCACCGACATGCTGCGAACGGCTGATGCGGTGAACG
ACTGGCGGCATGGCCGCTCAGTGGGTGACGGACCGGTTTCGCCGGCAGCGACCGGCATGATGCCGCCCCCTGATTCACGG
GTTCAGAGTGTCATCCAGAACGGCAGGCTGTGGGTGTGGGTCGCTGATACGCCGGGCGTTTATGCCGCGCTCCGTAATCA
GTCGACAACATCGGCGCTGGCTTTGACCGTTTCGGGGGGGCGGCTGCGCATGTATGACGGCACTGATATGAATCTTTCCC
TTCCGTCCGGCGTGACGGAGGGGAGCATTGTTTACCTTAACTGA

Protein sequence :
MGFALPIIALAMFFGLMASDAQRRNSDIVTQSVTVAAPSRLATDMLRTADAVNDWRHGRSVGDGPVSPAATGMMPPPDSR
VQSVIQNGRLWVWVADTPGVYAALRNQSTTSALALTVSGGRLRMYDGTDMNLSLPSGVTEGSIVYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3735 YP_001402689.1 PilM protein Not tested YAPI Protein 3e-30 49
pilM CAF28486.1 putative exported protein Virulence YAPI Protein 2e-30 49
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein Virulence YAPI Protein 1e-28 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3874 YP_005994582.1 type IV pilus operon exported poprotein PilM VFG2309 Protein 3e-29 45