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Name : PAGR_g3870 (PAGR_g3870) Accession : YP_005994578.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Virulence Product : type IV secretion system protein PilQ Function : - COG functional category : - COG ID : - EC number : - Position : 4202250 - 4203812 bp Length : 1563 bp Strand : - Note : - DNA sequence : ATGATACCGGCTAAGGAAATCGCAGACTTTGTGTTCGCCGAGCACCACCCTGTTCAGGGCGTGACGCTGCTTATCGATAA AAACCGCCGCCAGGACCCGGCCATTCAGCGCTGGGCGATGGACTCGGCGAAACAGTATCCGGGCGCCAGAACCGAATTTG TTTCGCTCAGTGAGCTGAACCAGCGTCGTGAAAGTGCCGCCGCACTAGGCCCGGGCGTGACGGAGGATGACCTGAGCACA AAGGACGTCAGCCGTTCACAGGATAAAGTGCTGAGCTATTTCCGCCTGGCGAATGAACTGAATGCGTCAGATATTCATCT GGAAATCAGCGCCGACCGCAAGCTTACCGTCATTCAGCTGCGCATCCACGGCGAGCTTGAGGTGATTGACGAGCTGACCG ACGAGGAAGGCACGACGCTGGCATCCACCGTGTATATTTCCATGTGCGACGTGCGCGAACAGTCATTTGTCGCGGGGCGC GAGCAGTCGGGGCGCGTCAGTTCGAAATTTGCGCGTCAGGCCGGCCTTTTCGGGGCGCGTTACGAACACCGCCCCACGCC TGACGGCCTCTACCTGGTCATGCGCATGATCCCCGATGACAGCAAAAACATTCCCACACTGCCGCAGCTGGGTTTTCTGG CTGAGCAGATCAAAATCATCACGCAGATCCTTCGCCTGCCGTCTGGCATGGTGCTGGTGACCGGGCCGACCGGGGCAGGA AAAAGCGCCACCCTTCGCGTGTTAAGCGATATCTGGCTGACCCTCACCGGCGGTAAAAAGCGCCTGCTGACACTGGAAAA CCCGCCGGAAGGCCTCATCCCCGGCGCAATCCAGACGCCGGTTATGCCCGATGACAACACGCCGGAAGCCATCAGCCGGG CCTGGAATAACGCCAACGCCTCGGCGCTGCGACTCGATCCCGACGCCATCCTGAACGGTGAAATGCGGGACTTCTATTCC ATTATGGCGGGCATTTACGGCACCGAAACGGGGCATATTTTCATGTCTACCCAGCACACGCTCAGCGCTATCGGCGCCCT GAGTCGCATGGAGCATTTTGGTATCAAGCGACAGCTGCTGGCCGATGCGTCCCTTATCACCGGGCTGATTGGTCAGCGTC TGGTGCCGCTGCTGTGTGACAACTGCAAAATCTCCTGGGCAGACAAATTGCCTGAGCTGGACAGCGATACCCGCGAGCGT CTGGAAAAATACTGCACAGTGAAGGGGGGCTGTCGTCCTGAGCAGCTTTTTTTCCGCAATCCGGAAGGCTGCGACCGCTG CCGCAAAGTCATCCCGGTCACGAAGCGCGTGGTCAGCAAAGGCATCACTGGCCGAACTGCCGTGGTGGAAGTCGTCCGCA CTGACGCGATGATGATGCAGTTGTGGCTCAATCAGGGAGCGGCCGTGGCCCGTCAGTACTGGGTGAACAAAGGCGGCATC ACCCGCGTGATGCACCTTCTGCGCTACCTTGCTGAGGGGCGCGTTGACCCGCTTGAAGGTGACCTGGTCTGCCCACTGGA CGAAGACGAGCTGATGCGCTGCGAGGTTCCCCATGTCGCGTAA Protein sequence : MIPAKEIADFVFAEHHPVQGVTLLIDKNRRQDPAIQRWAMDSAKQYPGARTEFVSLSELNQRRESAAALGPGVTEDDLST KDVSRSQDKVLSYFRLANELNASDIHLEISADRKLTVIQLRIHGELEVIDELTDEEGTTLASTVYISMCDVREQSFVAGR EQSGRVSSKFARQAGLFGARYEHRPTPDGLYLVMRMIPDDSKNIPTLPQLGFLAEQIKIITQILRLPSGMVLVTGPTGAG KSATLRVLSDIWLTLTGGKKRLLTLENPPEGLIPGAIQTPVMPDDNTPEAISRAWNNANASALRLDPDAILNGEMRDFYS IMAGIYGTETGHIFMSTQHTLSAIGALSRMEHFGIKRQLLADASLITGLIGQRLVPLLCDNCKISWADKLPELDSDTRER LEKYCTVKGGCRPEQLFFRNPEGCDRCRKVIPVTKRVVSKGITGRTAVVEVVRTDAMMMQLWLNQGAAVARQYWVNKGGI TRVMHLLRYLAEGRVDPLEGDLVCPLDEDELMRCEVPHVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | Virulence | YAPI | Protein | 8e-139 | 56 |
| pilQ | CAF28490.1 | putative ATP binding protein | Virulence | YAPI | Protein | 1e-136 | 56 |
| YE3502 | YP_001007663.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 2e-138 | 55 |
| pilQ | AAF14817.2 | PilQ | Virulence | SPI-7 | Protein | 2e-115 | 50 |
| pilQ | NP_458633.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 2e-115 | 50 |
| pilQ | NP_807844.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 2e-115 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAGR_g3870 | YP_005994578.1 | type IV secretion system protein PilQ | VFG2313 | Protein | 9e-139 | 55 |
