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Name : PAGR_g3869 (PAGR_g3869) Accession : YP_005994577.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilR Function : - COG functional category : - COG ID : - EC number : - Position : 4201145 - 4202260 bp Length : 1116 bp Strand : - Note : - DNA sequence : ATGTCGCGTAATCTGCGCTTTCGCACTGAGCGGGACTTGTCCCTTTTTGAAAAATGCCGCTATCACGCCGTCAGGCTGAC CTTCACCGGGTCACACCGGCAGGTCTTCTATGAAAACATGCGTTTTCTACTGGAAAACAGAAAGCATCTTGAGACCTCGC TGAAAATGATTGGCGAGGTGCACACCAGTTTCGGTGAGAAATGGCATCCCTTCCTTGAACTCACCGAAGACTGCCTTGAG GGGCTCCGGGATAACTCGCCAGGCCGGACTCTGGCGGATGTGCTGGCGGTATGGGTGCCCTACGAAGAGGCCGCGCTGAT CAGTGCCGGGATGAAGACGGGCAATATTCCCGTTGCCCTGATGCAGGCAGACAAACTCATCAATGCCCGTGAGCAGATCT TCGGTCAGGTCGTGTTTGCATCGGTTTACCCGCTGGTTCTGCTCGTGCTGGGCGGCGGTCTGCTCGGGGTCAATAACCAG TCCCTCGTCCCGATGCTGAGCAGAATGTCTGATCCGGCCAGCTGGAGCGGGGCACTCGGGTTCATGAAGGGGCTTTCTGA CTGGACAGAACAGTGGGGACCTGCCGCGGCATTCTCCGGTGCTGCTCTGGTTGTGGCCAGCCTGTGGTCCCTTCCCCGGT GGCGCGGCAGAATTCGTCGTCTTGCTGACAGCATTATGCCCTGGTCTCTCTATAAAGATTTGCAGGGTGCGGTCTTTCTG ATGAACACCGGTGCCCTTCTTGGGGCCGGCGTGCATGAGCTTGAAGCCATGCAACTGCTGCACAGCTTCGCGCCGCCCTG GCTGCAGGAGCGCCTTGATGCGGCGATGGACGAGATGAGTGAAGGCAATTCACTCGGTATGGCGCTGCGCAAAAGTGGTT ACGACTTCCCTAGTCGCGAGGCCGTGAACTACCTGTCACTGCTTGACGACGGAGACGGCGCCGCTGAGCTTATCAGCAAC TATGCCGACCGCTGGCTGACACAGACCCTCAGGCGGGTGGCCCGCAGGGCTAATGTAACCCGTCTTTTATCCATGCTTCT GATTATGGGGTTCTTCGCGCTGATCATCATGATGGTCATGCAGATCCAGGACTCCGGCTCACTTAACCTTCACTGA Protein sequence : MSRNLRFRTERDLSLFEKCRYHAVRLTFTGSHRQVFYENMRFLLENRKHLETSLKMIGEVHTSFGEKWHPFLELTEDCLE GLRDNSPGRTLADVLAVWVPYEEAALISAGMKTGNIPVALMQADKLINAREQIFGQVVFASVYPLVLLVLGGGLLGVNNQ SLVPMLSRMSDPASWSGALGFMKGLSDWTEQWGPAAAFSGAALVVASLWSLPRWRGRIRRLADSIMPWSLYKDLQGAVFL MNTGALLGAGVHELEAMQLLHSFAPPWLQERLDAAMDEMSEGNSLGMALRKSGYDFPSREAVNYLSLLDDGDGAAELISN YADRWLTQTLRRVARRANVTRLLSMLLIMGFFALIIMMVMQIQDSGSLNLH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilR | YP_001402684.1 | type IV pilus biogenesis protein PilR | Virulence | YAPI | Protein | 2e-82 | 57 |
| YE3501 | YP_001007662.1 | type IV pilus integral membrane protein | Virulence | YAPI | Protein | 1e-86 | 56 |
| pilR | CAF28491.1 | putative integral inner membrane protein | Virulence | YAPI | Protein | 1e-82 | 55 |
| pilR | NP_458634.1 | putative membrane protein | Virulence | SPI-7 | Protein | 3e-60 | 45 |
| pilR | NP_807845.1 | hypothetical protein | Virulence | SPI-7 | Protein | 3e-60 | 45 |
| pilR | AAC98886.2 | PilR | Virulence | SPI-7 | Protein | 2e-60 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAGR_g3869 | YP_005994577.1 | type IV pilus biogenesis protein PilR | VFG2314 | Protein | 6e-87 | 56 |
