Gene Information

Name : PAGR_g3868 (PAGR_g3868)
Accession : YP_005994576.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : putative conjugative transfer outer membrane protein PilS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4200545 - 4201135 bp
Length : 591 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTTTTAAACACTACTGCAGGAAAGCACCCTGATAGGGGCTGGGGATTTATGGAACAGGGTGCCATCGGCCTCCT
TTATGCCATTGTCATCACAGTGGTTTTGGGGGGCGTCTGGAAGCTGTTCAGTGCCAAAGACTCCACAACGGAGGTGTCCA
GCCTGCAGACTATGATGAGCAACGGGACGGCACTGAAAGGACCTAACGGCTATGACTTCAGCAGCGGCGCCTCTATGACC
GGCTTCCTGATCCAGAAAGGCGGCGCACCGTCCGGCTTTACCGTGCACGGCACAGCCTCATCCGGCACCGCGACGCTCAC
CAACAGCTATGGTGGACAGGTGGTCATGGCGCCGGTGGCAAACAGCAATGGTTATAACAATGGATTCTCAGTGACGACCC
AGAGCGTGACGCAGGCCGGCTGCATTGACATTGCCACCCGCATGGCTTCTGCAGGCTCCTCCAGCTCACTGGCCATCAAC
AGTACCGATTTCAGCAGCGGTCAGGTGAGCTCTGAGGCGATCGGTCAGGCCTGTACCGCAGACAGCGGCCGGACCGGCAA
TAACACACTGGTATTCACGCACAACGGCTGA

Protein sequence :
MSFLNTTAGKHPDRGWGFMEQGAIGLLYAIVITVVLGGVWKLFSAKDSTTEVSSLQTMMSNGTALKGPNGYDFSSGASMT
GFLIQKGGAPSGFTVHGTASSGTATLTNSYGGQVVMAPVANSNGYNNGFSVTTQSVTQAGCIDIATRMASAGSSSSLAIN
STDFSSGQVSSEAIGQACTADSGRTGNNTLVFTHNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 2e-30 47
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 2e-28 47
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 3e-28 46
pilS AAC98887.1 PilS Virulence SPI-7 Protein 4e-29 46
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 6e-29 46
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 6e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3868 YP_005994576.1 putative conjugative transfer outer membrane protein PilS VFG2315 Protein 5e-31 47