Gene Information

Name : PAGR_g3862 (PAGR_g3862)
Accession : YP_005994570.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : putative soluble lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4195320 - 4195937 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence :
ATGGCAGGTCGCGGCGTACTGAAAAAGGCGGCCCTCGTGCTCTGTCTTGTCAGCTGCGCCTGCAGTGCGGCTGACAGCCG
CCAGGTCATTCCGGATGCATACCGGCAGATAGCGGCAGCAGAACGCGTGCCGGCGGAGTCGCTGTATTCACTGGCTATGG
CAGAGAGCACCCGCAAAACCGCCTGGGGTGCCAAACCCTGGCCGTGGACCATCAACGTCGCCGGGCGGGGTTATCACTAT
GAGACGCGTGAAGCGGCTTTCACCGCGCTGCTGGGGTTCATGCAGCGCTGGCCGCTGAAGAACATCGATGTCGGCGTGGC
GCAGGTCAACCTGGGCTGGAACGGGCATTTTTTTCCGACTTACCGCGACGCCTTTGACCCGTATCTCAACCTCCGCGCGG
CCGCCCGCATACTCCGGGCCTGCTATGACGCGCGTCCCGGCAGTTGGTTAAGCGCGGCGGGCTGTTATCACCATCCGGCC
GGCGGTAAAGCGGCGCAGACCTACATCGCCATCGTCCGCCGAAAGCTTGGCCAGATTGCCCAGGATACGTCCGGTGCACC
GTCTGTCACGCCGGTCGAGCTCGCCAGTAACACCCTTACCTGGATCGAACCGAAATGA

Protein sequence :
MAGRGVLKKAALVLCLVSCACSAADSRQVIPDAYRQIAAAERVPAESLYSLAMAESTRKTAWGAKPWPWTINVAGRGYHY
ETREAAFTALLGFMQRWPLKNIDVGVAQVNLGWNGHFFPTYRDAFDPYLNLRAAARILRACYDARPGSWLSAAGCYHHPA
GGKAAQTYIAIVRRKLGQIAQDTSGAPSVTPVELASNTLTWIEPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 4e-48 63
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 1e-46 62
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 2e-46 62
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 2e-41 52
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 2e-41 52
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 2e-34 51
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-19 48
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 6e-19 48
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-21 47